This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1dne

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:56, 7 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1dne.png|left|200px]]
 
-
<!--
+
==MOLECULAR STRUCTURE OF THE NETROPSIN-D(CGCGATATCGCG) COMPLEX: DNA CONFORMATION IN AN ALTERNATING AT SEGMENT; CONFORMATION 2==
-
The line below this paragraph, containing "STRUCTURE_1dne", creates the "Structure Box" on the page.
+
<StructureSection load='1dne' size='340' side='right'caption='[[1dne]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1dne]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DNE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DNE FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NT:NETROPSIN'>NT</scene></td></tr>
-
{{STRUCTURE_1dne| PDB=1dne | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dne FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dne OCA], [https://pdbe.org/1dne PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dne RCSB], [https://www.ebi.ac.uk/pdbsum/1dne PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dne ProSAT]</span></td></tr>
-
 
+
</table>
-
===MOLECULAR STRUCTURE OF THE NETROPSIN-D(CGCGATATCGCG) COMPLEX: DNA CONFORMATION IN AN ALTERNATING AT SEGMENT; CONFORMATION 2===
+
__TOC__
-
 
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
<!--
+
[[Category: Aymami J]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_2539859}}, adds the Publication Abstract to the page
+
[[Category: Coll M]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 2539859 is the PubMed ID number.
+
[[Category: Rich A]]
-
-->
+
[[Category: Van Boom JH]]
-
{{ABSTRACT_PUBMED_2539859}}
+
[[Category: Van Der Marel GA]]
-
 
+
[[Category: Wang AH-J]]
-
==About this Structure==
+
-
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DNE OCA].
+
-
 
+
-
==Reference==
+
-
Molecular structure of the netropsin-d(CGCGATATCGCG) complex: DNA conformation in an alternating AT segment., Coll M, Aymami J, van der Marel GA, van Boom JH, Rich A, Wang AH, Biochemistry. 1989 Jan 10;28(1):310-20. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/2539859 2539859]
+
-
[[Category: Aymami, J.]]
+
-
[[Category: Boom, J H.Van.]]
+
-
[[Category: Coll, M.]]
+
-
[[Category: Marel, G A.Van Der.]]
+
-
[[Category: Rich, A.]]
+
-
[[Category: Wang, A H.J.]]
+
-
[[Category: B-dna]]
+
-
[[Category: Complexed with drug]]
+
-
[[Category: Double helix]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 23:20:01 2008''
+

Current revision

MOLECULAR STRUCTURE OF THE NETROPSIN-D(CGCGATATCGCG) COMPLEX: DNA CONFORMATION IN AN ALTERNATING AT SEGMENT; CONFORMATION 2

PDB ID 1dne

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1dne"
Personal tools