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1dnv

From Proteopedia

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{{Seed}}
 
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[[Image:1dnv.png|left|200px]]
 
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==PARVOVIRUS (DENSOVIRUS) FROM GALLERIA MELLONELLA==
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The line below this paragraph, containing "STRUCTURE_1dnv", creates the "Structure Box" on the page.
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<StructureSection load='1dnv' size='340' side='right'caption='[[1dnv]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1dnv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Galleria_mellonella_densovirus Galleria mellonella densovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DNV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DNV FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.6&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dnv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dnv OCA], [https://pdbe.org/1dnv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dnv RCSB], [https://www.ebi.ac.uk/pdbsum/1dnv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dnv ProSAT]</span></td></tr>
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{{STRUCTURE_1dnv| PDB=1dnv | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CAPSD_GMDNV CAPSD_GMDNV] Capsid protein self-assembles to form an icosahedral capsid with a T=1 symmetry, about 22 nm in diameter, and consisting of 60 copies of size variants of the capsid proteins, which differ in the N-terminushe capsid encapsulates the genomic ssDNA. Capsid proteins are responsible for the attachment to host cell receptors. This attachment induces virion internalization predominantly through clathrin-dependent endocytosis (By similarity).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dn/1dnv_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dnv ConSurf].
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<div style="clear:both"></div>
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===PARVOVIRUS (DENSOVIRUS) FROM GALLERIA MELLONELLA===
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==See Also==
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*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_9817847}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 9817847 is the PubMed ID number.
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{{ABSTRACT_PUBMED_9817847}}
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==About this Structure==
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1DNV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Galleria_mellonella_densovirus Galleria mellonella densovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DNV OCA].
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==Reference==
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The structure of an insect parvovirus (Galleria mellonella densovirus) at 3.7 A resolution., Simpson AA, Chipman PR, Baker TS, Tijssen P, Rossmann MG, Structure. 1998 Nov 15;6(11):1355-67. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9817847 9817847]
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[[Category: Galleria mellonella densovirus]]
[[Category: Galleria mellonella densovirus]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Baker, T S.]]
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[[Category: Baker TS]]
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[[Category: Chipmann, P R.]]
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[[Category: Chipmann PR]]
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[[Category: Rossmann, M G.]]
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[[Category: Rossmann MG]]
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[[Category: Simpson, A A.]]
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[[Category: Simpson AA]]
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[[Category: Tijssen, P.]]
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[[Category: Tijssen P]]
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[[Category: Capsid protein]]
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[[Category: Densovirus]]
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[[Category: Icosahedral virus]]
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[[Category: Parvovirus]]
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[[Category: Viral capsid]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 23:20:58 2008''
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Current revision

PARVOVIRUS (DENSOVIRUS) FROM GALLERIA MELLONELLA

PDB ID 1dnv

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