1f2m
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="1f2m" size="450" color="white" frame="true" align="right" spinBox="true" caption="1f2m, resolution 2.00Å" /> '''SIMPLIFICATION OF A ...) |
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| - | [[Image:1f2m.jpg|left|200px]]<br /><applet load="1f2m" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1f2m, resolution 2.00Å" /> | ||
| - | '''SIMPLIFICATION OF A PROTEIN LOOP IN STAPHYLOCOCCAL NUCLEASE'''<br /> | ||
| - | == | + | ==SIMPLIFICATION OF A PROTEIN LOOP IN STAPHYLOCOCCAL NUCLEASE== |
| - | + | <StructureSection load='1f2m' size='340' side='right'caption='[[1f2m]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | [ | + | <table><tr><td colspan='2'>[[1f2m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F2M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1F2M FirstGlance]. <br> |
| - | [ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1f2m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f2m OCA], [https://pdbe.org/1f2m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1f2m RCSB], [https://www.ebi.ac.uk/pdbsum/1f2m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1f2m ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | [ | + | == Function == |
| - | [[ | + | [https://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond. |
| - | [ | + | == Evolutionary Conservation == |
| - | [[ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [ | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f2/1f2m_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1f2m ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Staphylococcal nuclease 3D structures|Staphylococcal nuclease 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Staphylococcus aureus]] | ||
| + | [[Category: Adelman DM]] | ||
| + | [[Category: Fox RO]] | ||
| + | [[Category: Harkins PC]] | ||
| + | [[Category: Hodel A]] | ||
| + | [[Category: White MA]] | ||
Current revision
SIMPLIFICATION OF A PROTEIN LOOP IN STAPHYLOCOCCAL NUCLEASE
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