1dql

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{{Seed}}
 
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[[Image:1dql.png|left|200px]]
 
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==CRYSTAL STRUCTURE OF AN UNLIGANDED (NATIVE) FV FROM A HUMAN IGM ANTI-PEPTIDE ANTIBODY==
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The line below this paragraph, containing "STRUCTURE_1dql", creates the "Structure Box" on the page.
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<StructureSection load='1dql' size='340' side='right'caption='[[1dql]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1dql]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DQL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DQL FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
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{{STRUCTURE_1dql| PDB=1dql | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dql FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dql OCA], [https://pdbe.org/1dql PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dql RCSB], [https://www.ebi.ac.uk/pdbsum/1dql PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dql ProSAT]</span></td></tr>
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</table>
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===CRYSTAL STRUCTURE OF AN UNLIGANDED (NATIVE) FV FROM A HUMAN IGM ANTI-PEPTIDE ANTIBODY===
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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The line below this paragraph, {{ABSTRACT_PUBMED_11000403}}, adds the Publication Abstract to the page
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dq/1dql_consurf.spt"</scriptWhenChecked>
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(as it appears on PubMed at http://www.pubmed.gov), where 11000403 is the PubMed ID number.
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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{{ABSTRACT_PUBMED_11000403}}
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dql ConSurf].
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==About this Structure==
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<div style="clear:both"></div>
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Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DQL OCA].
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__TOC__
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</StructureSection>
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==Reference==
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[[Category: Homo sapiens]]
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An unusual human IgM antibody with a protruding HCDR3 and high avidity for its peptide ligands., Ramsland PA, Shan L, Moomaw CR, Slaughter CA, Fan Z, Guddat LW, Edmundson AB, Mol Immunol. 2000 Apr;37(6):295-310. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11000403 11000403]
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[[Category: Large Structures]]
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[[Category: Edmundson, A B.]]
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[[Category: Edmundson AB]]
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[[Category: Guddat, L W.]]
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[[Category: Guddat LW]]
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[[Category: Moomaw, C R.]]
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[[Category: Moomaw CR]]
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[[Category: Ramsland, P A.]]
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[[Category: Ramsland PA]]
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[[Category: Shan, L.]]
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[[Category: Shan L]]
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[[Category: Slaughter, C A.]]
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[[Category: Slaughter CA]]
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[[Category: Antibody]]
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[[Category: Fv]]
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[[Category: Igm]]
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[[Category: Immunoglobulin fold]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 23:28:18 2008''
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Current revision

CRYSTAL STRUCTURE OF AN UNLIGANDED (NATIVE) FV FROM A HUMAN IGM ANTI-PEPTIDE ANTIBODY

PDB ID 1dql

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