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1dw1

From Proteopedia

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{{Seed}}
 
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[[Image:1dw1.png|left|200px]]
 
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==STRUCTURE OF THE CYANIDE COMPLEX OF SHP, AN OXYGEN BINDING CYTOCHROME C==
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The line below this paragraph, containing "STRUCTURE_1dw1", creates the "Structure Box" on the page.
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<StructureSection load='1dw1' size='340' side='right'caption='[[1dw1]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1dw1]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Cereibacter_sphaeroides Cereibacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DW1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DW1 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>
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{{STRUCTURE_1dw1| PDB=1dw1 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dw1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dw1 OCA], [https://pdbe.org/1dw1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dw1 RCSB], [https://www.ebi.ac.uk/pdbsum/1dw1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dw1 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SHP_CERS4 SHP_CERS4] High-spin cytochrome. Transiently bind oxygen during autoxidation, which occurs with a half-life of 3 min with a 4-fold excess of O(2). Also binds carbon monoxide, azide and cyanide.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dw/1dw1_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dw1 ConSurf].
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<div style="clear:both"></div>
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===STRUCTURE OF THE CYANIDE COMPLEX OF SHP, AN OXYGEN BINDING CYTOCHROME C===
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==See Also==
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*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_10821858}}, adds the Publication Abstract to the page
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[[Category: Cereibacter sphaeroides]]
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(as it appears on PubMed at http://www.pubmed.gov), where 10821858 is the PubMed ID number.
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[[Category: Large Structures]]
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[[Category: Backers K]]
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{{ABSTRACT_PUBMED_10821858}}
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[[Category: Cusanovich MA]]
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[[Category: Hagen WR]]
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==About this Structure==
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[[Category: Leys D]]
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1DW1 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rhodobacter_sphaeroides Rhodobacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DW1 OCA].
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[[Category: Meyer TE]]
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[[Category: Van Beeumen JJ]]
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==Reference==
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Crystal structures of an oxygen-binding cytochrome c from Rhodobacter sphaeroides., Leys D, Backers K, Meyer TE, Hagen WR, Cusanovich MA, Van Beeumen JJ, J Biol Chem. 2000 May 26;275(21):16050-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10821858 10821858]
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[[Category: Rhodobacter sphaeroides]]
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[[Category: Single protein]]
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[[Category: Backers, K.]]
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[[Category: Beeumen, J J.Van.]]
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[[Category: Cusanovich, M A.]]
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[[Category: Hagen, W R.]]
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[[Category: Leys, D.]]
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[[Category: Meyer, T E.]]
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[[Category: Asparagine ligation]]
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[[Category: Cyanide complex]]
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[[Category: Cytochrome c]]
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[[Category: Disulfide bridge]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 23:42:18 2008''
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Current revision

STRUCTURE OF THE CYANIDE COMPLEX OF SHP, AN OXYGEN BINDING CYTOCHROME C

PDB ID 1dw1

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