1e4r

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{{Seed}}
 
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[[Image:1e4r.png|left|200px]]
 
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==Solution structure of the mouse defensin mBD-8==
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The line below this paragraph, containing "STRUCTURE_1e4r", creates the "Structure Box" on the page.
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<StructureSection load='1e4r' size='340' side='right'caption='[[1e4r]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1e4r]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E4R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E4R FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e4r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e4r OCA], [https://pdbe.org/1e4r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e4r RCSB], [https://www.ebi.ac.uk/pdbsum/1e4r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e4r ProSAT]</span></td></tr>
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{{STRUCTURE_1e4r| PDB=1e4r | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/DEFB8_MOUSE DEFB8_MOUSE] A synthetic peptide displays antimicrobial activities against S.aureus, P.aeruginosa, E.coli and B.cepacia. The antimicrobial activity against S.aureus, E.coli and B.cepacia is reduced in raised concentration of NaCl, but its action against P.aeruginosa is independent of NaCl concentration.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Defensins are cationic and cysteine-rich peptides that play a crucial role in the host defense against microorganisms of many organisms by their capability to permeabilize bacterial membranes. The low sequence similarity among the members of the large mammalian beta-defensin family suggests that their antimicrobial activity is largely independent of their primary structure. To investigate to what extent these defensins share a similar fold, the structures of the two human beta-defensins, hBD-1 and hBD-2, as well as those of two novel murine defensins, termed mBD-7 and mBD-8, were determined by nuclear magnetic resonance spectroscopy. All four defensins investigated share a striking similarity on the level of secondary and tertiary structure including the lack of a distinct hydrophobic core, suggesting that the fold is mainly stabilized by the presence of three disulfide bonds. In addition to the overall shape of the molecules, the ratio of solvent-exposed polar and hydrophobic side chains is also very similar among the four defensins investigated. It is significant that beta-defensins do not exhibit a common pattern of charged and hydrophobic residues on the protein surface and that the beta-defensin-specific fold appears to accommodate a wide range of different amino acids at most sequence positions. In addition to the implications for the mode of biological defensin actions, these findings are of particular interest because beta-defensins have been suggested as lead compounds for the development of novel peptide antibiotics for the therapy of infectious diseases.
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===SOLUTION STRUCTURE OF THE MOUSE DEFENSIN MBD-8===
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Structure determination of human and murine beta-defensins reveals structural conservation in the absence of significant sequence similarity.,Bauer F, Schweimer K, Kluver E, Conejo-Garcia JR, Forssmann WG, Rosch P, Adermann K, Sticht H Protein Sci. 2001 Dec;10(12):2470-9. PMID:11714914<ref>PMID:11714914</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 1e4r" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_11714914}}, adds the Publication Abstract to the page
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*[[Defensin 3D structures|Defensin 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 11714914 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_11714914}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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1E4R is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E4R OCA].
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==Reference==
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Structure determination of human and murine beta-defensins reveals structural conservation in the absence of significant sequence similarity., Bauer F, Schweimer K, Kluver E, Conejo-Garcia JR, Forssmann WG, Rosch P, Adermann K, Sticht H, Protein Sci. 2001 Dec;10(12):2470-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11714914 11714914]
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[[Category: Mus musculus]]
[[Category: Mus musculus]]
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[[Category: Single protein]]
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[[Category: Adermann K]]
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[[Category: Adermann, K.]]
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[[Category: Bauer F]]
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[[Category: Bauer, F.]]
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[[Category: Forssmann WG]]
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[[Category: Forssmann, W G.]]
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[[Category: Kluver E]]
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[[Category: Kluver, E.]]
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[[Category: Roesch P]]
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[[Category: Roesch, P.]]
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[[Category: Schweimer K]]
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[[Category: Schweimer, K.]]
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[[Category: Sticht H]]
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[[Category: Sticht, H.]]
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[[Category: Defensin]]
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[[Category: Mouse]]
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[[Category: Nmr structure]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 00:08:53 2008''
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Current revision

Solution structure of the mouse defensin mBD-8

PDB ID 1e4r

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