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1ef8

From Proteopedia

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{{Seed}}
 
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[[Image:1ef8.png|left|200px]]
 
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==CRYSTAL STRUCTURE OF METHYLMALONYL COA DECARBOXYLASE==
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The line below this paragraph, containing "STRUCTURE_1ef8", creates the "Structure Box" on the page.
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<StructureSection load='1ef8' size='340' side='right'caption='[[1ef8]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1ef8]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EF8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EF8 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
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{{STRUCTURE_1ef8| PDB=1ef8 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ef8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ef8 OCA], [https://pdbe.org/1ef8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ef8 RCSB], [https://www.ebi.ac.uk/pdbsum/1ef8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ef8 ProSAT]</span></td></tr>
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</table>
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===CRYSTAL STRUCTURE OF METHYLMALONYL COA DECARBOXYLASE===
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== Function ==
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[https://www.uniprot.org/uniprot/SCPB_ECOLI SCPB_ECOLI] Catalyzes the decarboxylation of methylmalonyl-CoA to propionyl-CoA. Could be part of a pathway that converts succinate to propionate.<ref>PMID:10769117</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_10769118}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 10769118 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ef/1ef8_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_10769118}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1EF8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EF8 OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ef8 ConSurf].
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<div style="clear:both"></div>
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==Reference==
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== References ==
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New reactions in the crotonase superfamily: structure of methylmalonyl CoA decarboxylase from Escherichia coli., Benning MM, Haller T, Gerlt JA, Holden HM, Biochemistry. 2000 Apr 25;39(16):4630-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10769118 10769118]
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<references/>
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__TOC__
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</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: Methylmalonyl-CoA decarboxylase]]
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[[Category: Large Structures]]
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[[Category: Single protein]]
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[[Category: Benning MM]]
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[[Category: Benning, M M.]]
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[[Category: Gerlt JA]]
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[[Category: Gerlt, J A.]]
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[[Category: Haller T]]
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[[Category: Haller, T.]]
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[[Category: Holden HM]]
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[[Category: Holden, H M.]]
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[[Category: Decarboxylase]]
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[[Category: Methylmalonyl coa]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 00:36:20 2008''
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Current revision

CRYSTAL STRUCTURE OF METHYLMALONYL COA DECARBOXYLASE

PDB ID 1ef8

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