1epu

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{{Seed}}
 
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[[Image:1epu.png|left|200px]]
 
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==X-RAY crystal structure of neuronal SEC1 from squid==
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The line below this paragraph, containing "STRUCTURE_1epu", creates the "Structure Box" on the page.
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<StructureSection load='1epu' size='340' side='right'caption='[[1epu]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1epu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Doryteuthis_pealeii Doryteuthis pealeii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EPU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EPU FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_1epu| PDB=1epu | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1epu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1epu OCA], [https://pdbe.org/1epu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1epu RCSB], [https://www.ebi.ac.uk/pdbsum/1epu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1epu ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/O62547_DORPE O62547_DORPE]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ep/1epu_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1epu ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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BACKGROUND: Sec1-like molecules have been implicated in a variety of eukaryotic vesicle transport processes including neurotransmitter release by exocytosis. They regulate vesicle transport by binding to a t-SNARE from the syntaxin family. This process is thought to prevent SNARE complex formation, a protein complex required for membrane fusion. Whereas Sec1 molecules are essential for neurotransmitter release and other secretory events, their interaction with syntaxin molecules seems to represent a negative regulatory step in secretion. RESULTS: Here we report the X-ray crystal structure of a neuronal Sec1 homologue from squid, s-Sec1, at 2.4 A resolution. Neuronal s-Sec1 is a modular protein that folds into a V-shaped three-domain assembly. Peptide and mutagenesis studies are discussed with respect to the mechanism of Sec1 regulation. Comparison of the structure of squid s-Sec1 with the previously determined structure of rat neuronal Sec1 (n-Sec1) bound to syntaxin-1a indicates conformational rearrangements in domain III induced by syntaxin binding. CONCLUSIONS: The crystal structure of s-Sec1 provides the molecular scaffold for a number of molecular interactions that have been reported to affect Sec1 function. The structural differences observed between s-Sec1 and the structure of a rat n-Sec1-syntaxin-1a complex suggest that local conformational changes are sufficient to release syntaxin-1a from neuronal Sec1, an active process that is thought to involve additional effector molecule(s).
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===X-RAY CRYSTAL STRUCTURE OF NEURONAL SEC1 FROM SQUID===
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The X-ray crystal structure of neuronal Sec1 from squid sheds new light on the role of this protein in exocytosis.,Bracher A, Perrakis A, Dresbach T, Betz H, Weissenhorn W Structure. 2000 Jul 15;8(7):685-94. PMID:10903948<ref>PMID:10903948</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_10903948}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 1epu" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 10903948 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_10903948}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Doryteuthis pealeii]]
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1EPU is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Loligo_pealei Loligo pealei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EPU OCA].
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[[Category: Large Structures]]
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[[Category: Betz H]]
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==Reference==
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[[Category: Bracher A]]
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The X-ray crystal structure of neuronal Sec1 from squid sheds new light on the role of this protein in exocytosis., Bracher A, Perrakis A, Dresbach T, Betz H, Weissenhorn W, Structure. 2000 Jul 15;8(7):685-94. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10903948 10903948]
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[[Category: Dresbach T]]
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[[Category: Loligo pealei]]
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[[Category: Perrakis A]]
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[[Category: Single protein]]
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[[Category: Weissenhorn W]]
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[[Category: Betz, H.]]
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[[Category: Bracher, A.]]
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[[Category: Dresbach, T.]]
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[[Category: Perrakis, A.]]
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[[Category: Weissenhorn, W.]]
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[[Category: Helical bundle]]
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[[Category: Left-hand turn connection]]
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[[Category: Parallel beta-sheet]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 01:34:06 2008''
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Current revision

X-RAY crystal structure of neuronal SEC1 from squid

PDB ID 1epu

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