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1fye

From Proteopedia

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{{Seed}}
 
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[[Image:1fye.png|left|200px]]
 
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==Aspartyl Dipeptidase (Anisotropic B-Factor Refinement)==
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The line below this paragraph, containing "STRUCTURE_1fye", creates the "Structure Box" on the page.
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<StructureSection load='1fye' size='340' side='right'caption='[[1fye]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1fye]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FYE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FYE FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
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{{STRUCTURE_1fye| PDB=1fye | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1fye FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fye OCA], [https://pdbe.org/1fye PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1fye RCSB], [https://www.ebi.ac.uk/pdbsum/1fye PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1fye ProSAT]</span></td></tr>
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</table>
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===ASPARTYL DIPEPTIDASE (ANISOTROPIC B-FACTOR REFINEMENT)===
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== Function ==
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[https://www.uniprot.org/uniprot/PEPE_SALTY PEPE_SALTY] Hydrolyzes dipeptides containing N-terminal aspartate residues. May play a role in allowing the cell to use peptide aspartate to spare carbon otherwise required for the synthesis of the aspartate family of amino acids.[HAMAP-Rule:MF_00510]
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== Evolutionary Conservation ==
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<!--
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_11106384}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 11106384 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fy/1fye_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_11106384}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1FYE is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FYE OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1fye ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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The structure of aspartyl dipeptidase reveals a unique fold with a Ser-His-Glu catalytic triad., Hakansson K, Wang AH, Miller CG, Proc Natl Acad Sci U S A. 2000 Dec 19;97(26):14097-102. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11106384 11106384]
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</StructureSection>
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[[Category: Salmonella typhimurium]]
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[[Category: Large Structures]]
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[[Category: Single protein]]
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[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
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[[Category: Hakansson, K.]]
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[[Category: Hakansson K]]
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[[Category: Miller, C G.]]
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[[Category: Miller CG]]
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[[Category: Wang, A H.J.]]
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[[Category: Wang AH-J]]
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[[Category: Catalytic triad]]
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[[Category: Peptidase]]
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[[Category: Serine protease]]
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[[Category: Strand-helix motif]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 04:07:37 2008''
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Current revision

Aspartyl Dipeptidase (Anisotropic B-Factor Refinement)

PDB ID 1fye

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