1g29

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:21, 7 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1g29.png|left|200px]]
 
-
<!--
+
==MALK==
-
The line below this paragraph, containing "STRUCTURE_1g29", creates the "Structure Box" on the page.
+
<StructureSection load='1g29' size='340' side='right'caption='[[1g29]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1g29]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_litoralis Thermococcus litoralis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G29 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1G29 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene></td></tr>
-
{{STRUCTURE_1g29| PDB=1g29 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1g29 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g29 OCA], [https://pdbe.org/1g29 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1g29 RCSB], [https://www.ebi.ac.uk/pdbsum/1g29 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1g29 ProSAT]</span></td></tr>
-
 
+
</table>
-
===MALK===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/MALK_THELN MALK_THELN] Part of the ABC transporter complex MalEFGK involved in trehalose/maltose import. Responsible for energy coupling to the transport system.<ref>PMID:10400644</ref> <ref>PMID:11453995</ref> <ref>PMID:8759837</ref>
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_11080142}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 11080142 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g2/1g29_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_11080142}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1G29 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermococcus_litoralis Thermococcus litoralis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G29 OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1g29 ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
== References ==
-
Crystal structure of MalK, the ATPase subunit of the trehalose/maltose ABC transporter of the archaeon Thermococcus litoralis., Diederichs K, Diez J, Greller G, Muller C, Breed J, Schnell C, Vonrhein C, Boos W, Welte W, EMBO J. 2000 Nov 15;19(22):5951-61. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11080142 11080142]
+
<references/>
-
[[Category: Single protein]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Thermococcus litoralis]]
[[Category: Thermococcus litoralis]]
-
[[Category: Boos, W.]]
+
[[Category: Boos W]]
-
[[Category: Breed, J.]]
+
[[Category: Breed J]]
-
[[Category: Diederichs, K.]]
+
[[Category: Diederichs K]]
-
[[Category: Diez, J.]]
+
[[Category: Diez J]]
-
[[Category: Greller, G.]]
+
[[Category: Greller G]]
-
[[Category: Mueller, C.]]
+
[[Category: Mueller C]]
-
[[Category: Schnell, C.]]
+
[[Category: Schnell C]]
-
[[Category: Vonrhein, C.]]
+
[[Category: Vonrhein C]]
-
[[Category: Welte, W.]]
+
[[Category: Welte W]]
-
[[Category: Active transport]]
+
-
[[Category: Atpase]]
+
-
[[Category: Maltose uptake and regulation]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 04:17:57 2008''
+

Current revision

MALK

PDB ID 1g29

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1g29"
Personal tools