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6pti

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(New page: 200px<br /><applet load="6pti" size="450" color="white" frame="true" align="right" spinBox="true" caption="6pti, resolution 1.7&Aring;" /> '''STRUCTURE OF FORM III...)
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[[Image:6pti.gif|left|200px]]<br /><applet load="6pti" size="450" color="white" frame="true" align="right" spinBox="true"
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==STRUCTURE OF FORM III CRYSTALS OF BOVINE PANCREATIC TRYPSIN INHIBITOR==
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caption="6pti, resolution 1.7&Aring;" />
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<StructureSection load='6pti' size='340' side='right' caption='[[6pti]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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'''STRUCTURE OF FORM III CRYSTALS OF BOVINE PANCREATIC TRYPSIN INHIBITOR'''<br />
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6pti]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bovin Bovin]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6PTI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6PTI FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6pti FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6pti OCA], [http://pdbe.org/6pti PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6pti RCSB], [http://www.ebi.ac.uk/pdbsum/6pti PDBsum]</span></td></tr>
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</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/BPT1_BOVIN BPT1_BOVIN]] Inhibits trypsin, kallikrein, chymotrypsin, and plasmin.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pt/6pti_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=6pti ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The structure of bovine pancreatic trypsin inhibitor has been solved in a new crystal form III. The crystals belong to space group P2(1)2(1)2 with a = 55.2 A, b = 38.2 A, c = 24.05 A. The structure was solved on the basis of co-ordinates of forms I and II of the inhibitor by molecular replacement, and the X-ray data extending to 1.7 A were used in a restrained least-squares refinement. The final R factor was 0.16, and the deviation of bonded distances from ideality was 0.020 A. Root-mean-square discrepancy between C alpha co-ordinates of forms III and I are 0.47 A, whilst between forms II and III the discrepancy is 0.39 A. These deviations are about a factor of 3 larger than the expected experimental errors, showing that true differences exist between the three crystal forms. Two residues (Arg39 and Asp50) were modeled with two positions for their side-chains. The final model includes 73 water molecules and one phosphate group bound to the protein. Sixteen water molecules occupy approximately the same positions in all three crystal forms studied to date, indicating their close association with the protein molecule. Temperature factors also show a high degree of correlation between the three crystal forms.
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==Overview==
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Structure of form III crystals of bovine pancreatic trypsin inhibitor.,Wlodawer A, Nachman J, Gilliland GL, Gallagher W, Woodward C J Mol Biol. 1987 Dec 5;198(3):469-80. PMID:2448484<ref>PMID:2448484</ref>
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The structure of bovine pancreatic trypsin inhibitor has been solved in a, new crystal form III. The crystals belong to space group P2(1)2(1)2 with a, = 55.2 A, b = 38.2 A, c = 24.05 A. The structure was solved on the basis, of co-ordinates of forms I and II of the inhibitor by molecular, replacement, and the X-ray data extending to 1.7 A were used in a, restrained least-squares refinement. The final R factor was 0.16, and the, deviation of bonded distances from ideality was 0.020 A. Root-mean-square, discrepancy between C alpha co-ordinates of forms III and I are 0.47 A, whilst between forms II and III the discrepancy is 0.39 A. These, deviations are about a factor of 3 larger than the expected experimental, errors, showing that true differences exist between the three crystal, forms. Two residues (Arg39 and Asp50) were modeled with two positions for, their side-chains. The final model includes 73 water molecules and one, phosphate group bound to the protein. Sixteen water molecules occupy, approximately the same positions in all three crystal forms studied to, date, indicating their close association with the protein molecule., Temperature factors also show a high degree of correlation between the, three crystal forms.
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==About this Structure==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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6PTI is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus] with PO4 as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=6PTI OCA].
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</div>
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<div class="pdbe-citations 6pti" style="background-color:#fffaf0;"></div>
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==Reference==
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==See Also==
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Structure of form III crystals of bovine pancreatic trypsin inhibitor., Wlodawer A, Nachman J, Gilliland GL, Gallagher W, Woodward C, J Mol Biol. 1987 Dec 5;198(3):469-80. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=2448484 2448484]
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*[[Basic Pancreatic Trypsin Inhibitor|Basic Pancreatic Trypsin Inhibitor]]
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[[Category: Bos taurus]]
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== References ==
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[[Category: Single protein]]
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<references/>
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[[Category: Wlodawer, A.]]
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__TOC__
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[[Category: PO4]]
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</StructureSection>
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[[Category: proteinase inhibitor (trypsin)]]
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[[Category: Bovin]]
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[[Category: Wlodawer, A]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 15:25:22 2007''
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STRUCTURE OF FORM III CRYSTALS OF BOVINE PANCREATIC TRYPSIN INHIBITOR

6pti, resolution 1.70Å

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