1goj

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{{Seed}}
 
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[[Image:1goj.png|left|200px]]
 
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==Structure of a fast kinesin: Implications for ATPase mechanism and interactions with microtubules==
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The line below this paragraph, containing "STRUCTURE_1goj", creates the "Structure Box" on the page.
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<StructureSection load='1goj' size='340' side='right'caption='[[1goj]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1goj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neurospora_crassa Neurospora crassa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GOJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GOJ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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{{STRUCTURE_1goj| PDB=1goj | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1goj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1goj OCA], [https://pdbe.org/1goj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1goj RCSB], [https://www.ebi.ac.uk/pdbsum/1goj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1goj ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/KINH_NEUCR KINH_NEUCR] Kinesin is a microtubule-associated force-producing protein that may play a role in organelle transport. Its motor activity is directed toward the microtubule's plus end.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/go/1goj_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1goj ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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We determined the crystal structure of the motor domain of the fast fungal kinesin from Neurospora crassa (NcKin). The structure has several unique features. (i) Loop 11 in the switch 2 region is ordered and enables one to describe the complete nucleotide-binding pocket, including three inter-switch salt bridges between switch 1 and 2. (ii) Loop 9 in the switch 1 region bends outwards, making the nucleotide-binding pocket very wide. The displacement in switch 1 resembles that of the G-protein ras complexed with its guanosine nucleotide exchange factor. (iii) Loop 5 in the entrance to the nucleotide-binding pocket is remarkably long and interacts with the ribose of ATP. (iv) The linker and neck region is not well defined, indicating that it is mobile. (v) Image reconstructions of ice-embedded microtubules decorated with NcKin show that it interacts with several tubulin subunits, including a central beta-tubulin monomer and the two flanking alpha-tubulin monomers within the microtubule protofilament. Comparison of NcKin with other kinesins, myosin and G-proteins suggests that the rate-limiting step of ADP release is accelerated in the fungal kinesin and accounts for the unusually high velocity and ATPase activity.
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===STRUCTURE OF A FAST KINESIN: IMPLICATIONS FOR ATPASE MECHANISM AND INTERACTIONS WITH MICROTUBULES===
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Structure of a fast kinesin: implications for ATPase mechanism and interactions with microtubules.,Song YH, Marx A, Muller J, Woehlke G, Schliwa M, Krebs A, Hoenger A, Mandelkow E EMBO J. 2001 Nov 15;20(22):6213-25. PMID:11707393<ref>PMID:11707393</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 1goj" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_11707393}}, adds the Publication Abstract to the page
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*[[Kinesin 3D Structures|Kinesin 3D Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 11707393 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_11707393}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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1GOJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Neurospora_crassa Neurospora crassa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GOJ OCA].
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==Reference==
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Structure of a fast kinesin: implications for ATPase mechanism and interactions with microtubules., Song YH, Marx A, Muller J, Woehlke G, Schliwa M, Krebs A, Hoenger A, Mandelkow E, EMBO J. 2001 Nov 15;20(22):6213-25. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11707393 11707393]
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[[Category: Neurospora crassa]]
[[Category: Neurospora crassa]]
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[[Category: Plus-end-directed kinesin ATPase]]
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[[Category: Hoenger A]]
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[[Category: Single protein]]
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[[Category: Krebs A]]
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[[Category: Hoenger, A.]]
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[[Category: Mandelkow E]]
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[[Category: Krebs, A.]]
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[[Category: Marx A]]
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[[Category: Mandelkow, E.]]
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[[Category: Muller J]]
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[[Category: Marx, A.]]
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[[Category: Schliwa M]]
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[[Category: Muller, J.]]
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[[Category: Song Y-H]]
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[[Category: Schliwa, M.]]
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[[Category: Woehlke G]]
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[[Category: Song, Y H.]]
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[[Category: Woehlke, G.]]
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[[Category: Atpase]]
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[[Category: Kinesin]]
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[[Category: Motor protein]]
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[[Category: Neurospora crassa]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 05:36:28 2008''
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Current revision

Structure of a fast kinesin: Implications for ATPase mechanism and interactions with microtubules

PDB ID 1goj

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