1h64

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:28, 27 March 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1h64.png|left|200px]]
 
-
<!--
+
==CRYSTAL STRUCTURE OF THE SM-RELATED PROTEIN OF P. ABYSSI: THE BIOLOGICAL UNIT IS A HEPTAMER==
-
The line below this paragraph, containing "STRUCTURE_1h64", creates the "Structure Box" on the page.
+
<StructureSection load='1h64' size='340' side='right'caption='[[1h64]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1h64]] is a 28 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_abyssi Pyrococcus abyssi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H64 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1H64 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1h64 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h64 OCA], [https://pdbe.org/1h64 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1h64 RCSB], [https://www.ebi.ac.uk/pdbsum/1h64 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1h64 ProSAT]</span></td></tr>
-
{{STRUCTURE_1h64| PDB=1h64 | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RUXX_PYRAB RUXX_PYRAB]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h6/1h64_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1h64 ConSurf].
 +
<div style="clear:both"></div>
-
===CRYSTAL STRUCTURE OF THE SM-RELATED PROTEIN OF P. ABYSSI THE BIOLOGICAL UNIT IS A HEPTAMER===
+
==See Also==
-
 
+
*[[Sm-like protein 3D structures|Sm-like protein 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_12409299}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 12409299 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_12409299}}
+
-
 
+
-
==About this Structure==
+
-
1H64 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_abyssi Pyrococcus abyssi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H64 OCA].
+
-
 
+
-
==Reference==
+
-
Crystal structures of the Pyrococcus abyssi Sm core and its complex with RNA. Common features of RNA binding in archaea and eukarya., Thore S, Mayer C, Sauter C, Weeks S, Suck D, J Biol Chem. 2003 Jan 10;278(2):1239-47. Epub 2002 Oct 29. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12409299 12409299]
+
[[Category: Pyrococcus abyssi]]
[[Category: Pyrococcus abyssi]]
-
[[Category: Single protein]]
+
[[Category: Mayer C]]
-
[[Category: Mayer, C.]]
+
[[Category: Suck D]]
-
[[Category: Suck, D.]]
+
[[Category: Weeks S]]
-
[[Category: Weeks, S.]]
+
-
[[Category: Sm fold]]
+
-
[[Category: Sm-like protein]]
+
-
[[Category: Snrnp core]]
+
-
[[Category: Spliceosome]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 06:41:20 2008''
+

Current revision

CRYSTAL STRUCTURE OF THE SM-RELATED PROTEIN OF P. ABYSSI: THE BIOLOGICAL UNIT IS A HEPTAMER

PDB ID 1h64

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools