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1hql

From Proteopedia

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{{Seed}}
 
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[[Image:1hql.png|left|200px]]
 
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<!--
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==The xenograft antigen in complex with the B4 isolectin of Griffonia simplicifolia lectin-1==
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The line below this paragraph, containing "STRUCTURE_1hql", creates the "Structure Box" on the page.
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<StructureSection load='1hql' size='340' side='right'caption='[[1hql]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1hql]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Griffonia_simplicifolia Griffonia simplicifolia]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HQL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HQL FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=MBG:METHYL-BETA-GALACTOSE'>MBG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
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{{STRUCTURE_1hql| PDB=1hql | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hql FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hql OCA], [https://pdbe.org/1hql PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hql RCSB], [https://www.ebi.ac.uk/pdbsum/1hql PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hql ProSAT]</span></td></tr>
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</table>
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===The xenograft antigen in complex with the B4 isolectin of Griffonia simplicifolia lectin-1===
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== Function ==
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[https://www.uniprot.org/uniprot/Q8W1R6_GRISI Q8W1R6_GRISI]
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== Evolutionary Conservation ==
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<!--
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_11714721}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 11714721 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hq/1hql_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_11714721}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HQL OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hql ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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The xenograft antigen bound to Griffonia simplicifolia lectin 1-B(4). X-ray crystal structure of the complex and molecular dynamics characterization of the binding site., Tempel W, Tschampel S, Woods RJ, J Biol Chem. 2002 Feb 22;277(8):6615-21. Epub 2001 Nov 19. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11714721 11714721]
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</StructureSection>
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[[Category: Lipscomb, L A.]]
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[[Category: Rose, J P.]]
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[[Category: Tempel, W.]]
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[[Category: Woods, R J.]]
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[[Category: Griffonia simplicifolia]]
[[Category: Griffonia simplicifolia]]
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[[Category: Lectin]]
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[[Category: Large Structures]]
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[[Category: Xenograft antigen]]
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[[Category: Lipscomb LA]]
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[[Category: Rose JP]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 08:32:48 2008''
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[[Category: Tempel W]]
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[[Category: Woods RJ]]

Current revision

The xenograft antigen in complex with the B4 isolectin of Griffonia simplicifolia lectin-1

PDB ID 1hql

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