1g9j

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1g9j" size="450" color="white" frame="true" align="right" spinBox="true" caption="1g9j, resolution 1.90&Aring;" /> '''X-TAL STRUCTURE OF T...)
Current revision (07:24, 7 February 2024) (edit) (undo)
 
(18 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1g9j.jpg|left|200px]]<br /><applet load="1g9j" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1g9j, resolution 1.90&Aring;" />
 
-
'''X-TAL STRUCTURE OF THE MUTANT E44Q OF THE CELLULASE CEL48F IN COMPLEX WITH A THIOOLIGOSACCHARIDE'''<br />
 
-
==About this Structure==
+
==X-TAL STRUCTURE OF THE MUTANT E44Q OF THE CELLULASE CEL48F IN COMPLEX WITH A THIOOLIGOSACCHARIDE==
-
1G9J is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_cellulolyticum Clostridium cellulolyticum] with GLC, SGC, CA and CL as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1G9J OCA].
+
<StructureSection load='1g9j' size='340' side='right'caption='[[1g9j]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
[[Category: Cellulase]]
+
== Structural highlights ==
-
[[Category: Clostridium cellulolyticum]]
+
<table><tr><td colspan='2'>[[1g9j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruminiclostridium_cellulolyticum Ruminiclostridium cellulolyticum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G9J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1G9J FirstGlance]. <br>
-
[[Category: Single protein]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
[[Category: Belaich, J.P.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SGC:4-DEOXY-4-THIO-BETA-D-GLUCOPYRANOSE'>SGC</scene></td></tr>
-
[[Category: Driguez, H.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1g9j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g9j OCA], [https://pdbe.org/1g9j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1g9j RCSB], [https://www.ebi.ac.uk/pdbsum/1g9j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1g9j ProSAT]</span></td></tr>
-
[[Category: Haser, R.]]
+
</table>
-
[[Category: Parsiegla, G.]]
+
== Function ==
-
[[Category: Tardif, C.]]
+
[https://www.uniprot.org/uniprot/GUNF_RUMCH GUNF_RUMCH] Probable endoglucanase involved in the degradation of cellulose or related beta-glucans.
-
[[Category: CA]]
+
== Evolutionary Conservation ==
-
[[Category: CL]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: GLC]]
+
Check<jmol>
-
[[Category: SGC]]
+
<jmolCheckbox>
-
[[Category: alpha-alpha-6-barrel]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g9/1g9j_consurf.spt"</scriptWhenChecked>
-
[[Category: cellulase]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: thiooligosaccharide]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 15:51:26 2007''
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1g9j ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Ruminiclostridium cellulolyticum]]
 +
[[Category: Belaich JP]]
 +
[[Category: Driguez H]]
 +
[[Category: Haser R]]
 +
[[Category: Parsiegla G]]
 +
[[Category: Tardif C]]

Current revision

X-TAL STRUCTURE OF THE MUTANT E44Q OF THE CELLULASE CEL48F IN COMPLEX WITH A THIOOLIGOSACCHARIDE

PDB ID 1g9j

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools