1i6e

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:44, 3 April 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1i6e.png|left|200px]]
 
-
<!--
+
==SOLUTION STRUCTURE OF THE FUNCTIONAL DOMAIN OF PARACOCCUS DENITRIFICANS CYTOCHROME C552 IN THE OXIDIZED STATE==
-
The line below this paragraph, containing "STRUCTURE_1i6e", creates the "Structure Box" on the page.
+
<StructureSection load='1i6e' size='340' side='right'caption='[[1i6e]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1i6e]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Paracoccus_denitrificans Paracoccus denitrificans]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1I6E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1I6E FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>
-
{{STRUCTURE_1i6e| PDB=1i6e | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1i6e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1i6e OCA], [https://pdbe.org/1i6e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1i6e RCSB], [https://www.ebi.ac.uk/pdbsum/1i6e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1i6e ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CY552_PARDE CY552_PARDE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i6/1i6e_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1i6e ConSurf].
 +
<div style="clear:both"></div>
-
===SOLUTION STRUCTURE OF THE FUNCTIONAL DOMAIN OF PARACOCCUS DENITRIFICANS CYTOCHROME C552 IN THE OXIDIZED STATE===
+
==See Also==
-
 
+
*[[Cytochrome c nitrite reductase|Cytochrome c nitrite reductase]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_11591150}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 11591150 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_11591150}}
+
-
 
+
-
==About this Structure==
+
-
1I6E is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Paracoccus_denitrificans Paracoccus denitrificans]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1I6E OCA].
+
-
 
+
-
==Reference==
+
-
Solution structure and dynamics of the functional domain of Paracoccus denitrificans cytochrome c(552) in both redox states., Reincke B, Perez C, Pristovsek P, Lucke C, Ludwig C, Lohr F, Rogov VV, Ludwig B, Ruterjans H, Biochemistry. 2001 Oct 16;40(41):12312-20. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11591150 11591150]
+
[[Category: Paracoccus denitrificans]]
[[Category: Paracoccus denitrificans]]
-
[[Category: Single protein]]
+
[[Category: Loehr F]]
-
[[Category: Loehr, F.]]
+
[[Category: Ludwig B]]
-
[[Category: Ludwig, B.]]
+
[[Category: Ludwig C]]
-
[[Category: Ludwig, C.]]
+
[[Category: Luecke C]]
-
[[Category: Luecke, C.]]
+
[[Category: Perez C]]
-
[[Category: Perez, C.]]
+
[[Category: Pristovsek P]]
-
[[Category: Pristovsek, P.]]
+
[[Category: Reincke B]]
-
[[Category: Reincke, B.]]
+
[[Category: Rogov VV]]
-
[[Category: Rogov, V V.]]
+
[[Category: Rueterjans H]]
-
[[Category: Rueterjans, H.]]
+
-
[[Category: Cytochrome c552]]
+
-
[[Category: Electron transport]]
+
-
[[Category: Heme]]
+
-
[[Category: Isotope enrichment {13c/15n}]]
+
-
[[Category: Nmr spectroscopy]]
+
-
[[Category: Redox state]]
+
-
[[Category: Solution structure]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 10:28:49 2008''
+

Current revision

SOLUTION STRUCTURE OF THE FUNCTIONAL DOMAIN OF PARACOCCUS DENITRIFICANS CYTOCHROME C552 IN THE OXIDIZED STATE

PDB ID 1i6e

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1i6e"
Personal tools