1ibv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:24, 14 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1ibv.png|left|200px]]
 
-
<!--
+
==STRUCTURE OF THE D53,54N MUTANT OF HISTIDINE DECARBOXYLASE BOUND WITH HISTIDINE METHYL ESTER AT-170 C==
-
The line below this paragraph, containing "STRUCTURE_1ibv", creates the "Structure Box" on the page.
+
<StructureSection load='1ibv' size='340' side='right'caption='[[1ibv]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1ibv]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactobacillus_sp._30A Lactobacillus sp. 30A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IBV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IBV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PVH:HISTIDINE-METHYL-ESTER'>PVH</scene>, <scene name='pdbligand=PYR:PYRUVIC+ACID'>PYR</scene></td></tr>
-
{{STRUCTURE_1ibv| PDB=1ibv | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ibv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ibv OCA], [https://pdbe.org/1ibv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ibv RCSB], [https://www.ebi.ac.uk/pdbsum/1ibv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ibv ProSAT]</span></td></tr>
-
 
+
</table>
-
===STRUCTURE OF THE D53,54N MUTANT OF HISTIDINE DECARBOXYLASE BOUND WITH HISTIDINE METHYL ESTER AT-170 C===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/DCHS_LACS3 DCHS_LACS3]
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_11835507}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 11835507 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ib/1ibv_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_11835507}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1IBV is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Lactobacillus_sp. Lactobacillus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IBV OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ibv ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
Structure and cooperativity of a T-state mutant of histidine decarboxylase from Lactobacillus 30a., Worley S, Schelp E, Monzingo AF, Ernst S, Robertus JD, Proteins. 2002 Feb 15;46(3):321-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11835507 11835507]
+
</StructureSection>
-
[[Category: Histidine decarboxylase]]
+
[[Category: Lactobacillus sp. 30A]]
-
[[Category: Lactobacillus sp.]]
+
[[Category: Large Structures]]
-
[[Category: Protein complex]]
+
[[Category: Ernst S]]
-
[[Category: Ernst, S.]]
+
[[Category: Monzingo AF]]
-
[[Category: Monzingo, A F.]]
+
[[Category: Robertus JD]]
-
[[Category: Robertus, J D.]]
+
[[Category: Schelp E]]
-
[[Category: Schelp, E.]]
+
[[Category: Worley S]]
-
[[Category: Worley, S.]]
+
-
[[Category: Active form]]
+
-
[[Category: Carboxy-lyase]]
+
-
[[Category: Pyruvoyl]]
+
-
[[Category: Site-directed mutant]]
+
-
[[Category: Substrate-induced activation]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 10:43:52 2008''
+

Current revision

STRUCTURE OF THE D53,54N MUTANT OF HISTIDINE DECARBOXYLASE BOUND WITH HISTIDINE METHYL ESTER AT-170 C

PDB ID 1ibv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools