1ija

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:47, 3 April 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1ija.png|left|200px]]
 
-
<!--
+
==Structure of Sortase==
-
The line below this paragraph, containing "STRUCTURE_1ija", creates the "Structure Box" on the page.
+
<StructureSection load='1ija' size='340' side='right'caption='[[1ija]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1ija]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IJA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IJA FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ija FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ija OCA], [https://pdbe.org/1ija PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ija RCSB], [https://www.ebi.ac.uk/pdbsum/1ija PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ija ProSAT]</span></td></tr>
-
{{STRUCTURE_1ija| PDB=1ija | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Structure of Sortase===
+
[https://www.uniprot.org/uniprot/Q9S446_STAAU Q9S446_STAAU]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_11371637}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 11371637 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ij/1ija_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_11371637}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ija ConSurf].
-
1IJA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IJA OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
Structure of sortase, the transpeptidase that anchors proteins to the cell wall of Staphylococcus aureus., Ilangovan U, Ton-That H, Iwahara J, Schneewind O, Clubb RT, Proc Natl Acad Sci U S A. 2001 May 22;98(11):6056-61. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11371637 11371637]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
-
[[Category: Clubb, R T.]]
+
[[Category: Clubb RT]]
-
[[Category: Ilangovan, U.]]
+
[[Category: Ilangovan U]]
-
[[Category: Iwahara, J.]]
+
[[Category: Iwahara J]]
-
[[Category: Schneewind, O.]]
+
[[Category: Schneewind O]]
-
[[Category: Ton-That, H.]]
+
[[Category: Ton-That H]]
-
[[Category: Eight stranded beta barrel]]
+
-
[[Category: Transpeptidase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 12:18:56 2008''
+

Current revision

Structure of Sortase

PDB ID 1ija

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools