1ixl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:27, 23 October 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1ixl.png|left|200px]]
 
-
<!--
+
==Crystal structure of uncharacterized protein PH1136 from Pyrococcus horikoshii==
-
The line below this paragraph, containing "STRUCTURE_1ixl", creates the "Structure Box" on the page.
+
<StructureSection load='1ixl' size='340' side='right'caption='[[1ixl]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1ixl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IXL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IXL FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_1ixl| PDB=1ixl | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ixl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ixl OCA], [https://pdbe.org/1ixl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ixl RCSB], [https://www.ebi.ac.uk/pdbsum/1ixl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ixl ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of uncharacterized protein PH1136 from Pyrococcus horikoshii===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/O58863_PYRHO O58863_PYRHO]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1IXL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IXL OCA].
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==Reference==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ix/1ixl_consurf.spt"</scriptWhenChecked>
-
Crystal structure of conserved protein PH1136 from Pyrococcus horikoshii., Tajika Y, Sakai N, Tanaka Y, Yao M, Watanabe N, Tanaka I, Proteins. 2004 Apr 1;55(1):210-3. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/14997554 14997554]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ixl ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii]]
[[Category: Pyrococcus horikoshii]]
-
[[Category: Single protein]]
+
[[Category: Sakai N]]
-
[[Category: Sakai, N.]]
+
[[Category: Tajika Y]]
-
[[Category: Tajika, Y.]]
+
[[Category: Tanaka I]]
-
[[Category: Tanaka, I.]]
+
[[Category: Tanaka Y]]
-
[[Category: Tanaka, Y.]]
+
[[Category: Watanabe N]]
-
[[Category: Watanabe, N.]]
+
[[Category: Yao M]]
-
[[Category: Yao, M.]]
+
-
[[Category: Alpha+beta]]
+
-
[[Category: Hot-dog-fold]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 14:10:43 2008''
+

Current revision

Crystal structure of uncharacterized protein PH1136 from Pyrococcus horikoshii

PDB ID 1ixl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1ixl"
Personal tools