1izm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:06, 21 November 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1izm.png|left|200px]]
 
-
<!--
+
==Structure of ygfB from Haemophilus influenzae (HI0817), a Conserved Hypothetical Protein==
-
The line below this paragraph, containing "STRUCTURE_1izm", creates the "Structure Box" on the page.
+
<StructureSection load='1izm' size='340' side='right'caption='[[1izm]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1izm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IZM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IZM FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_1izm| PDB=1izm | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1izm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1izm OCA], [https://pdbe.org/1izm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1izm RCSB], [https://www.ebi.ac.uk/pdbsum/1izm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1izm ProSAT]</span></td></tr>
-
 
+
</table>
-
===Structure of ygfB from Haemophilus influenzae (HI0817), a Conserved Hypothetical Protein===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Y817_HAEIN Y817_HAEIN]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1IZM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IZM OCA].
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==Reference==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iz/1izm_consurf.spt"</scriptWhenChecked>
-
X-ray structure of HI0817 from Haemophilus influenzae: protein of unknown function with a novel fold., Galkin A, Sarikaya E, Lehmann C, Howard A, Herzberg O, Proteins. 2004 Dec 1;57(4):874-7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15317022 15317022]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1izm ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Haemophilus influenzae]]
[[Category: Haemophilus influenzae]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Galkin, A.]]
+
[[Category: Galkin A]]
-
[[Category: Herzberg, O.]]
+
[[Category: Herzberg O]]
-
[[Category: Howard, A.]]
+
[[Category: Howard A]]
-
[[Category: Lehmann, C.]]
+
[[Category: Lehmann C]]
-
[[Category: S2F, Structure 2.Function Project.]]
+
[[Category: Sarikaya E]]
-
[[Category: Sarikaya, E.]]
+
-
[[Category: Hi0817]]
+
-
[[Category: Hypothetical protein]]
+
-
[[Category: S2f]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Structure 2 function project]]
+
-
[[Category: Ygfb]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 14:16:41 2008''
+

Current revision

Structure of ygfB from Haemophilus influenzae (HI0817), a Conserved Hypothetical Protein

PDB ID 1izm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1izm"
Personal tools