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1jbi

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{{Seed}}
 
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[[Image:1jbi.png|left|200px]]
 
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==NMR structure of the LCCL domain==
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The line below this paragraph, containing "STRUCTURE_1jbi", creates the "Structure Box" on the page.
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<StructureSection load='1jbi' size='340' side='right'caption='[[1jbi]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1jbi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JBI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JBI FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jbi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jbi OCA], [https://pdbe.org/1jbi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jbi RCSB], [https://www.ebi.ac.uk/pdbsum/1jbi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jbi ProSAT]</span></td></tr>
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{{STRUCTURE_1jbi| PDB=1jbi | SCENE= }}
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</table>
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== Disease ==
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===NMR structure of the LCCL domain===
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[https://www.uniprot.org/uniprot/COCH_HUMAN COCH_HUMAN] Defects in COCH are the cause of deafness autosomal dominant type 9 (DFNA9) [MIM:[https://omim.org/entry/601369 601369]. DFNA9 is a form of sensorineural hearing loss. Sensorineural deafness results from damage to the neural receptors of the inner ear, the nerve pathways to the brain, or the area of the brain that receives sound information. DFNA9 is characterized by onset in the fourth or fifth decade of life and initially involves the high frequencies. Deafness is progressive and usually complete by the sixth decade. In addition to cochlear involvement, DFNA9 patients also exhibit a spectrum of vestibular dysfunctions. Penetrance of the vestibular symptoms is often incomplete, and some patients are minimally affected, whereas others suffer from severe balance disturbances and episodes of vertigo. Affected individuals have mucopolysaccharide depositions in the channels of the cochlear and vestibular nerves. These depositions apparently cause strangulation and degeneration of dendritic fibers.<ref>PMID:9806553</ref> <ref>PMID:9931344</ref> <ref>PMID:10400989</ref> <ref>PMID:11295836</ref> <ref>PMID:14512963</ref> <ref>PMID:12928864</ref>
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== Function ==
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[https://www.uniprot.org/uniprot/COCH_HUMAN COCH_HUMAN] Plays a role in the control of cell shape and motility in the trabecular meshwork.<ref>PMID:21886777</ref>
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== Evolutionary Conservation ==
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The line below this paragraph, {{ABSTRACT_PUBMED_11574466}}, adds the Publication Abstract to the page
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[[Image:Consurf_key_small.gif|200px|right]]
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(as it appears on PubMed at http://www.pubmed.gov), where 11574466 is the PubMed ID number.
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Check<jmol>
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<jmolCheckbox>
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{{ABSTRACT_PUBMED_11574466}}
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jb/1jbi_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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==About this Structure==
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<text>to colour the structure by Evolutionary Conservation</text>
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1JBI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JBI OCA].
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jbi ConSurf].
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==Reference==
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<div style="clear:both"></div>
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NMR structure of the LCCL domain and implications for DFNA9 deafness disorder., Liepinsh E, Trexler M, Kaikkonen A, Weigelt J, Banyai L, Patthy L, Otting G, EMBO J. 2001 Oct 1;20(19):5347-53. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11574466 11574466]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Banyai, L.]]
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[[Category: Banyai L]]
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[[Category: Kaikkonen, A.]]
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[[Category: Kaikkonen A]]
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[[Category: Liepinsh, E.]]
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[[Category: Liepinsh E]]
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[[Category: Otting, G.]]
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[[Category: Otting G]]
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[[Category: Patthy, L.]]
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[[Category: Patthy L]]
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[[Category: Trexler, M.]]
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[[Category: Trexler M]]
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[[Category: Weigelt, J.]]
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[[Category: Weigelt J]]
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[[Category: Alpha-beta protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 19:58:28 2008''
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Current revision

NMR structure of the LCCL domain

PDB ID 1jbi

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