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1jqm

From Proteopedia

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{{Seed}}
 
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[[Image:1jqm.png|left|200px]]
 
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==Fitting of L11 protein and elongation factor G (EF-G) in the cryo-em map of e. coli 70S ribosome bound with EF-G, GDP and fusidic acid==
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The line below this paragraph, containing "STRUCTURE_1jqm", creates the "Structure Box" on the page.
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<SX load='1jqm' size='340' side='right' viewer='molstar' caption='[[1jqm]], [[Resolution|resolution]] 18.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1jqm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JQM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JQM FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 18&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jqm OCA], [https://pdbe.org/1jqm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jqm RCSB], [https://www.ebi.ac.uk/pdbsum/1jqm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jqm ProSAT]</span></td></tr>
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{{STRUCTURE_1jqm| PDB=1jqm | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RL11_THEMA RL11_THEMA] This protein binds directly to 23S ribosomal RNA.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jq/1jqm_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jqm ConSurf].
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<div style="clear:both"></div>
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===Fitting of L11 protein and elongation factor G (EF-G) in the cryo-em map of e. coli 70S ribosome bound with EF-G, GDP and fusidic acid===
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==See Also==
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*[[Elongation factor 3D structures|Elongation factor 3D structures]]
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*[[Ribosomal protein L11 3D structures|Ribosomal protein L11 3D structures]]
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__TOC__
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The line below this paragraph, {{ABSTRACT_PUBMED_11518530}}, adds the Publication Abstract to the page
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</SX>
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(as it appears on PubMed at http://www.pubmed.gov), where 11518530 is the PubMed ID number.
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{{ABSTRACT_PUBMED_11518530}}
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==About this Structure==
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1JQM is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JQM OCA].
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==Reference==
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Localization of L11 protein on the ribosome and elucidation of its involvement in EF-G-dependent translocation., Agrawal RK, Linde J, Sengupta J, Nierhaus KH, Frank J, J Mol Biol. 2001 Aug 24;311(4):777-87. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11518530 11518530]
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[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: Protein complex]]
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[[Category: Large Structures]]
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[[Category: Agrawal, R K.]]
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[[Category: Agrawal RK]]
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[[Category: Frank, J.]]
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[[Category: Frank J]]
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[[Category: Linde, J.]]
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[[Category: Linde J]]
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[[Category: Nierhaus, K H.]]
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[[Category: Nierhaus KH]]
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[[Category: Segupta, J.]]
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[[Category: Segupta J]]
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[[Category: 70s e coli ribosome]]
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[[Category: Cryo-em]]
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[[Category: Ef-g]]
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[[Category: Gdp state]]
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[[Category: L11]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 20:39:10 2008''
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Current revision

Fitting of L11 protein and elongation factor G (EF-G) in the cryo-em map of e. coli 70S ribosome bound with EF-G, GDP and fusidic acid

1jqm, resolution 18.00Å

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