This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1k7h

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:58, 3 April 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1k7h.png|left|200px]]
 
-
<!--
+
==CRYSTAL STRUCTURE OF SHRIMP ALKALINE PHOSPHATASE==
-
The line below this paragraph, containing "STRUCTURE_1k7h", creates the "Structure Box" on the page.
+
<StructureSection load='1k7h' size='340' side='right'caption='[[1k7h]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1k7h]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pandalus_borealis Pandalus borealis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K7H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K7H FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.92&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MAE:MALEIC+ACID'>MAE</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_1k7h| PDB=1k7h | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k7h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k7h OCA], [https://pdbe.org/1k7h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k7h RCSB], [https://www.ebi.ac.uk/pdbsum/1k7h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k7h ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9BHT8_PANBO Q9BHT8_PANBO]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k7/1k7h_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k7h ConSurf].
 +
<div style="clear:both"></div>
-
===CRYSTAL STRUCTURE OF SHRIMP ALKALINE PHOSPHATASE===
+
==See Also==
-
 
+
*[[Alkaline phosphatase 3D structures|Alkaline phosphatase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_12083516}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 12083516 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_12083516}}
+
-
 
+
-
==About this Structure==
+
-
1K7H is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pandalus_borealis Pandalus borealis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K7H OCA].
+
-
 
+
-
==Reference==
+
-
The 1.9 A crystal structure of heat-labile shrimp alkaline phosphatase., de Backer M, McSweeney S, Rasmussen HB, Riise BW, Lindley P, Hough E, J Mol Biol. 2002 May 17;318(5):1265-74. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12083516 12083516]
+
-
[[Category: Alkaline phosphatase]]
+
[[Category: Pandalus borealis]]
[[Category: Pandalus borealis]]
-
[[Category: Single protein]]
+
[[Category: De Backer ME]]
-
[[Category: Backer, M E.De.]]
+
[[Category: Hough E]]
-
[[Category: Hough, E.]]
+
[[Category: Lindley P]]
-
[[Category: Lindley, P.]]
+
[[Category: Mc Sweeney S]]
-
[[Category: Rasmussen, H B.]]
+
[[Category: Rasmussen HB]]
-
[[Category: Riise, B W.]]
+
[[Category: Riise BW]]
-
[[Category: Sweeney, S Mc.]]
+
-
[[Category: Extended beta sheet]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Metal triad]]
+
-
[[Category: Phosphomonoester]]
+
-
[[Category: Transferase]]
+
-
[[Category: Zinc triad]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 09:54:24 2008''
+

Current revision

CRYSTAL STRUCTURE OF SHRIMP ALKALINE PHOSPHATASE

PDB ID 1k7h

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1k7h"
Personal tools