1k9a

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{{Seed}}
 
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[[Image:1k9a.png|left|200px]]
 
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==Crystal structure analysis of full-length carboxyl-terminal Src kinase at 2.5 A resolution==
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The line below this paragraph, containing "STRUCTURE_1k9a", creates the "Structure Box" on the page.
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<StructureSection load='1k9a' size='340' side='right'caption='[[1k9a]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1k9a]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K9A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K9A FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k9a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k9a OCA], [https://pdbe.org/1k9a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k9a RCSB], [https://www.ebi.ac.uk/pdbsum/1k9a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k9a ProSAT]</span></td></tr>
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{{STRUCTURE_1k9a| PDB=1k9a | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CSK_RAT CSK_RAT] Non-receptor tyrosine-protein kinase that plays an important role in the regulation of cell growth, differentiation, migration and immune response. Phosphorylates tyrosine residues located in the C-terminal tails of Src-family kinases (SFKs) including LCK, SRC, HCK, FYN, LYN or YES1. Upon tail phosphorylation, Src-family members engage in intramolecular interactions between the phosphotyrosine tail and the SH2 domain that result in an inactive conformation. To inhibit SFKs, CSK is recruited to the plasma membrane via binding to transmembrane proteins or adapter proteins located near the plasma membrane. Suppresses signaling by various surface receptors, including T-cell receptor (TCR) and B-cell receptor (BCR) by phosphorylating and maintaining inactive several positive effectors such as FYN or LCK (By similarity).<ref>PMID:1722201</ref> <ref>PMID:7515063</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k9/1k9a_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k9a ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The carboxyl-terminal Src kinase (Csk) is an indispensable negative regulator for the Src family tyrosine kinases (SFKs) that play pivotal roles in various cell signalings. To understand the molecular basis of the Csk-mediated regulation of SFKs, we elucidated the crystal structure of full-length Csk. The Csk crystal consists of six molecules classified as active or inactive states according to the coordinations of catalytic residues. Csk assembles the SH2 and SH3 domains differently from inactive SFKs, and their binding pockets are oriented outward enabling the intermolecular interaction. In active molecules, the SH2-kinase and SH2-SH3 linkers are tightly stuck to the N-lobe of the kinase domain to stabilize the active conformation, and there is a direct linkage between the SH2 and the kinase domains. In inactive molecules, the SH2 domains are rotated destroying the linkage to the kinase domain. Cross-correlation matrices for the active molecules reveal that the SH2 domain and the N-lobe of the kinase domain move as a unit. These observations suggest that Csk can be regulated through coupling of the SH2 and kinase domains and that Csk provides a novel built-in activation mechanism for cytoplasmic tyrosine kinases.
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===Crystal structure analysis of full-length carboxyl-terminal Src kinase at 2.5 A resolution===
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Structure of the carboxyl-terminal Src kinase, Csk.,Ogawa A, Takayama Y, Sakai H, Chong KT, Takeuchi S, Nakagawa A, Nada S, Okada M, Tsukihara T J Biol Chem. 2002 Apr 26;277(17):14351-4. Epub 2002 Mar 7. PMID:11884384<ref>PMID:11884384</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 1k9a" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_11884384}}, adds the Publication Abstract to the page
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*[[Tyrosine kinase 3D structures|Tyrosine kinase 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 11884384 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_11884384}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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1K9A is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K9A OCA].
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==Reference==
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Structure of the carboxyl-terminal Src kinase, Csk., Ogawa A, Takayama Y, Sakai H, Chong KT, Takeuchi S, Nakagawa A, Nada S, Okada M, Tsukihara T, J Biol Chem. 2002 Apr 26;277(17):14351-4. Epub 2002 Mar 7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11884384 11884384]
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[[Category: Rattus norvegicus]]
[[Category: Rattus norvegicus]]
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[[Category: Single protein]]
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[[Category: Chong KT]]
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[[Category: Transferase]]
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[[Category: Nada S]]
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[[Category: Chong, K T.]]
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[[Category: Nagata A]]
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[[Category: Nada, S.]]
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[[Category: Nakagawa A]]
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[[Category: Nagata, A.]]
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[[Category: Ogawa A]]
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[[Category: Nakagawa, A.]]
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[[Category: Okada M]]
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[[Category: Ogawa, A.]]
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[[Category: Sakai H]]
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[[Category: Okada, M.]]
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[[Category: Takayama Y]]
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[[Category: Sakai, H.]]
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[[Category: Takeuchi S]]
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[[Category: Takayama, Y.]]
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[[Category: Tsukihara T]]
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[[Category: Takeuchi, S.]]
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[[Category: Tsukihara, T.]]
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[[Category: Cancer]]
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[[Category: Carboxyl-terminal src kinase]]
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[[Category: Cbp]]
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[[Category: Cooh-terminal src kinase]]
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[[Category: Csk]]
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[[Category: Cytoplasmic tyrosine kinase]]
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[[Category: Oncogene]]
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[[Category: Sfk]]
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[[Category: Sh2]]
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[[Category: Sh3]]
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[[Category: Signal transduction]]
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[[Category: Src]]
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[[Category: Src homology]]
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[[Category: Tyrosine kinase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 09:59:04 2008''
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Current revision

Crystal structure analysis of full-length carboxyl-terminal Src kinase at 2.5 A resolution

PDB ID 1k9a

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