1kaq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:45, 7 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1kaq.png|left|200px]]
 
-
<!--
+
==Structure of Bacillus subtilis Nicotinic Acid Mononucleotide Adenylyl Transferase==
-
The line below this paragraph, containing "STRUCTURE_1kaq", creates the "Structure Box" on the page.
+
<StructureSection load='1kaq' size='340' side='right'caption='[[1kaq]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1kaq]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KAQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KAQ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DND:NICOTINIC+ACID+ADENINE+DINUCLEOTIDE'>DND</scene></td></tr>
-
{{STRUCTURE_1kaq| PDB=1kaq | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kaq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kaq OCA], [https://pdbe.org/1kaq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kaq RCSB], [https://www.ebi.ac.uk/pdbsum/1kaq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kaq ProSAT]</span></td></tr>
-
 
+
</table>
-
===Structure of Bacillus subtilis Nicotinic Acid Mononucleotide Adenylyl Transferase===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/NADD_BACSU NADD_BACSU] Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_11704676}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 11704676 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ka/1kaq_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_11704676}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1KAQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KAQ OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1kaq ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
Identification, characterization, and crystal structure of Bacillus subtilis nicotinic acid mononucleotide adenylyltransferase., Olland AM, Underwood KW, Czerwinski RM, Lo MC, Aulabaugh A, Bard J, Stahl ML, Somers WS, Sullivan FX, Chopra R, J Biol Chem. 2002 Feb 1;277(5):3698-707. Epub 2001 Nov 9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11704676 11704676]
+
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
-
[[Category: Nicotinate-nucleotide adenylyltransferase]]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
[[Category: Aulabaugh A]]
-
[[Category: Aulabaugh, A.]]
+
[[Category: Bard J]]
-
[[Category: Bard, J.]]
+
[[Category: Chopra R]]
-
[[Category: Chopra, R.]]
+
[[Category: Czerwinski RM]]
-
[[Category: Czerwinski, R M.]]
+
[[Category: Lo MC]]
-
[[Category: Lo, M C.]]
+
[[Category: Olland AM]]
-
[[Category: Olland, A M.]]
+
[[Category: Somers WS]]
-
[[Category: Somers, W S.]]
+
[[Category: Stahl ML]]
-
[[Category: Stahl, M L.]]
+
[[Category: Sullivan FX]]
-
[[Category: Sullivan, F X.]]
+
[[Category: Underwood KW]]
-
[[Category: Underwood, K W.]]
+
-
[[Category: Naad]]
+
-
[[Category: Rossman fold]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 10:02:46 2008''
+

Current revision

Structure of Bacillus subtilis Nicotinic Acid Mononucleotide Adenylyl Transferase

PDB ID 1kaq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1kaq"
Personal tools