1kdl

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{{Seed}}
 
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[[Image:1kdl.png|left|200px]]
 
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==Solution structure of the amphipathic domain of YopD from Yersinia==
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The line below this paragraph, containing "STRUCTURE_1kdl", creates the "Structure Box" on the page.
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<StructureSection load='1kdl' size='340' side='right'caption='[[1kdl]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1kdl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis_IP_32953 Yersinia pseudotuberculosis IP 32953]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KDL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KDL FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kdl OCA], [https://pdbe.org/1kdl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kdl RCSB], [https://www.ebi.ac.uk/pdbsum/1kdl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kdl ProSAT]</span></td></tr>
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{{STRUCTURE_1kdl| PDB=1kdl | SCENE= }}
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</table>
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== Function ==
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===Solution structure of the amphipathic domain of YopD from Yersinia===
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[https://www.uniprot.org/uniprot/YOPD_YERPS YOPD_YERPS] Interacts with the target membrane to form channel structures involved either in translocation of YopE into the cytoplasmic space of the target cell or in the cytotoxic effect of the YopE protein.
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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The line below this paragraph, {{ABSTRACT_PUBMED_12153562}}, adds the Publication Abstract to the page
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[[Category: Yersinia pseudotuberculosis IP 32953]]
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(as it appears on PubMed at http://www.pubmed.gov), where 12153562 is the PubMed ID number.
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[[Category: Francis MS]]
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[[Category: Sethson I]]
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{{ABSTRACT_PUBMED_12153562}}
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[[Category: Tengel T]]
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==About this Structure==
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1KDL is a [[Single protein]] structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KDL OCA].
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==Reference==
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Conformational analysis by CD and NMR spectroscopy of a peptide encompassing the amphipathic domain of YopD from Yersinia., Tengel T, Sethson I, Francis MS, Eur J Biochem. 2002 Aug;269(15):3659-68. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12153562 12153562]
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[[Category: Single protein]]
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[[Category: Francis, M S.]]
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[[Category: Sethson, I.]]
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[[Category: Tengel, T.]]
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[[Category: Amphipathic alpha helix]]
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[[Category: Beta turn]]
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[[Category: Yersinia]]
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[[Category: Yopd]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 10:10:37 2008''
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Current revision

Solution structure of the amphipathic domain of YopD from Yersinia

PDB ID 1kdl

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