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1kdq

From Proteopedia

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{{Seed}}
 
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[[Image:1kdq.png|left|200px]]
 
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==Crystal Structure Analysis of the Mutant S189D Rat Chymotrypsin==
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The line below this paragraph, containing "STRUCTURE_1kdq", creates the "Structure Box" on the page.
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<StructureSection load='1kdq' size='340' side='right'caption='[[1kdq]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1kdq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KDQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KDQ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.55&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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{{STRUCTURE_1kdq| PDB=1kdq | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kdq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kdq OCA], [https://pdbe.org/1kdq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kdq RCSB], [https://www.ebi.ac.uk/pdbsum/1kdq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kdq ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CTRB1_RAT CTRB1_RAT]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kd/1kdq_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1kdq ConSurf].
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<div style="clear:both"></div>
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===Crystal Structure Analysis of the Mutant S189D Rat Chymotrypsin===
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==See Also==
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*[[Chymotrypsin 3D structures|Chymotrypsin 3D structures]]
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__TOC__
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<!--
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_12927546}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 12927546 is the PubMed ID number.
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-->
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{{ABSTRACT_PUBMED_12927546}}
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==About this Structure==
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1KDQ is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KDQ OCA].
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==Reference==
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Three dimensional structures of S189D chymotrypsin and D189S trypsin mutants: the effect of polarity at site 189 on a protease-specific stabilization of the substrate-binding site., Szabo E, Venekei I, Bocskei Z, Naray-Szabo G, Graf L, J Mol Biol. 2003 Aug 29;331(5):1121-30. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12927546 12927546]
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[[Category: Chymotrypsin]]
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[[Category: Protein complex]]
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[[Category: Rattus norvegicus]]
[[Category: Rattus norvegicus]]
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[[Category: Bocskei, Z.]]
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[[Category: Bocskei Z]]
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[[Category: Graf, L.]]
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[[Category: Graf L]]
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[[Category: Naray-Szabo, G.]]
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[[Category: Naray-Szabo G]]
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[[Category: Szabo, E.]]
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[[Category: Szabo E]]
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[[Category: Venekei, I.]]
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[[Category: Venekei I]]
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[[Category: Beta barrel]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 10:10:56 2008''
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Current revision

Crystal Structure Analysis of the Mutant S189D Rat Chymotrypsin

PDB ID 1kdq

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