This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1kpz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:31, 1 May 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1kpz.png|left|200px]]
 
-
<!--
+
==PEMV-1 P1-P2 Frameshifting Pseudoknot Regularized Average Structure==
-
The line below this paragraph, containing "STRUCTURE_1kpz", creates the "Structure Box" on the page.
+
<StructureSection load='1kpz' size='340' side='right'caption='[[1kpz]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1kpz]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KPZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KPZ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CH:N3-PROTONATED+CYTIDINE-5-MONOPHOSPHATE'>CH</scene></td></tr>
-
{{STRUCTURE_1kpz| PDB=1kpz | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kpz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kpz OCA], [https://pdbe.org/1kpz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kpz RCSB], [https://www.ebi.ac.uk/pdbsum/1kpz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kpz ProSAT]</span></td></tr>
-
 
+
</table>
-
===PEMV-1 P1-P2 Frameshifting Pseudoknot Regularized Average Structure===
+
__TOC__
-
 
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
<!--
+
[[Category: Giedroc DP]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_12225754}}, adds the Publication Abstract to the page
+
[[Category: Nixon PL]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 12225754 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_12225754}}
+
-
 
+
-
==About this Structure==
+
-
Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KPZ OCA].
+
-
 
+
-
==Reference==
+
-
Solution structure of a luteoviral P1-P2 frameshifting mRNA pseudoknot., Nixon PL, Rangan A, Kim YG, Rich A, Hoffman DW, Hennig M, Giedroc DP, J Mol Biol. 2002 Sep 20;322(3):621-33. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12225754 12225754]
+
-
[[Category: Giedroc, D P.]]
+
-
[[Category: Nixon, P L.]]
+
-
[[Category: Frameshifting]]
+
-
[[Category: Luteovirus]]
+
-
[[Category: Nmr]]
+
-
[[Category: Protonated cytidine]]
+
-
[[Category: Pseudoknot]]
+
-
[[Category: Ribonucleic acid]]
+
-
[[Category: Triple helix]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 10:44:31 2008''
+

Current revision

PEMV-1 P1-P2 Frameshifting Pseudoknot Regularized Average Structure

PDB ID 1kpz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools