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1kw9

From Proteopedia

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{{Seed}}
 
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[[Image:1kw9.png|left|200px]]
 
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<!--
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==Crystal structure of 2,3-dihydroxybiphenyl dioxygenase (BphC) in complex with 2,3-dihydroxybiphenyl at 2.0A resolution==
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The line below this paragraph, containing "STRUCTURE_1kw9", creates the "Structure Box" on the page.
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<StructureSection load='1kw9' size='340' side='right'caption='[[1kw9]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1kw9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_sp._KKS102 Pseudomonas sp. KKS102]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1eim 1eim]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KW9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KW9 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BPY:BIPHENYL-2,3-DIOL'>BPY</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene></td></tr>
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{{STRUCTURE_1kw9| PDB=1kw9 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kw9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kw9 OCA], [https://pdbe.org/1kw9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kw9 RCSB], [https://www.ebi.ac.uk/pdbsum/1kw9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kw9 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/BPHC_PSES1 BPHC_PSES1]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kw/1kw9_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1kw9 ConSurf].
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<div style="clear:both"></div>
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===Crystal structure of 2,3-dihydroxybiphenyl dioxygenase (BphC) in complex with 2,3-dihydroxybiphenyl at 2.0A resolution===
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==See Also==
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*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
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__TOC__
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<!--
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_12206778}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 12206778 is the PubMed ID number.
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[[Category: Pseudomonas sp. KKS102]]
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[[Category: Fukuda M]]
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{{ABSTRACT_PUBMED_12206778}}
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[[Category: Masai E]]
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[[Category: Nishizaki T]]
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==About this Structure==
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[[Category: Nonaka T]]
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1KW9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_sp. Pseudomonas sp.]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1eim 1eim]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KW9 OCA].
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[[Category: Sato N]]
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[[Category: Sazaki G]]
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==Reference==
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[[Category: Senda T]]
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Crystal structures of the reaction intermediate and its homologue of an extradiol-cleaving catecholic dioxygenase., Sato N, Uragami Y, Nishizaki T, Takahashi Y, Sazaki G, Sugimoto K, Nonaka T, Masai E, Fukuda M, Senda T, J Mol Biol. 2002 Aug 23;321(4):621-36. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12206778 12206778]
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[[Category: Sugimoto K]]
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[[Category: Biphenyl-2,3-diol 1,2-dioxygenase]]
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[[Category: Takahashi Y]]
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[[Category: Pseudomonas sp.]]
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[[Category: Uragami Y]]
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[[Category: Single protein]]
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[[Category: Fukuda, M.]]
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[[Category: Masai, E.]]
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[[Category: Nishizaki, T.]]
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[[Category: Nonaka, T.]]
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[[Category: Sato, N.]]
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[[Category: Sazaki, G.]]
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[[Category: Senda, T.]]
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[[Category: Sugimoto, K.]]
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[[Category: Takahashi, Y.]]
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[[Category: Uragami, Y.]]
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[[Category: Four time repetitions of the beta-alpha-beta-beta-beta motif]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 11:08:25 2008''
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Current revision

Crystal structure of 2,3-dihydroxybiphenyl dioxygenase (BphC) in complex with 2,3-dihydroxybiphenyl at 2.0A resolution

PDB ID 1kw9

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