1l3q

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[[Image:1l3q.png|left|200px]]
 
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==H. rufescens abalone shell Lustrin A consensus repeat, FPGKNVNCTSGE, pH 7.4, 1-H NMR structure==
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The line below this paragraph, containing "STRUCTURE_1l3q", creates the "Structure Box" on the page.
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<StructureSection load='1l3q' size='340' side='right'caption='[[1l3q]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1l3q]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1L3Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1L3Q FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1l3q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1l3q OCA], [https://pdbe.org/1l3q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1l3q RCSB], [https://www.ebi.ac.uk/pdbsum/1l3q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1l3q ProSAT]</span></td></tr>
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{{STRUCTURE_1l3q| PDB=1l3q | SCENE= }}
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The lustrin superfamily represents a unique group of biomineralization proteins localized between layered aragonite mineral plates (i.e., nacre layer) in mollusk shell. Recent atomic force microscopy (AFM) pulling studies have demonstrated that the lustrin-containing organic nacre layer in the abalone, Haliotis rufescens, exhibits a typical sawtooth force-extension curve with hysteretic recovery. This force extension behavior is reminiscent of reversible unfolding and refolding in elastomeric proteins such as titin and tenascin. Since secondary structure plays an important role in force-induced protein unfolding and refolding, the question is, What secondary structure(s) exist within the major domains of Lustrin A? Using a model peptide (FPGKNVNCTSGE) representing the 12-residue consensus sequence found near the N-termini of the first eight cysteine-rich domains (C-domains) within the Lustrin A protein, we employed CD, NMR spectroscopy, and simulated annealing/minimization to determine the secondary structure preferences for this sequence. At pH 7.4, we find that the 12-mer sequence adopts a loop conformation, consisting of a "bend" or "turn" involving residues G3-K4 and N7-C8-T9, with extended conformations arising at F1-G3; K4-V6; T9-S10-G11 in the sequence. Minor pH-dependent conformational effects were noted for this peptide; however, there is no evidence for a salt-bridge interaction between the K4 and E12 side chains. The presence of a loop conformation within the highly conserved -PG-, -NVNCT- sequence of C1-C8 domains may have important structural and mechanistic implications for the Lustrin A protein with regard to elastic behavior.
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===H. rufescens abalone shell Lustrin A consensus repeat, FPGKNVNCTSGE, pH 7.4, 1-H NMR structure===
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Model peptide studies of sequence regions in the elastomeric biomineralization protein, Lustrin A. I. The C-domain consensus-PG-, -NVNCT-motif.,Zhang B, Wustman BA, Morse D, Evans JS Biopolymers. 2002 May;63(6):358-69. PMID:11920437<ref>PMID:11920437</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<div class="pdbe-citations 1l3q" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 11920437 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_11920437}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1L3Q OCA].
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[[Category: Evans JS]]
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[[Category: Morse DE]]
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==Reference==
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[[Category: Wustman BA]]
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Model peptide studies of sequence regions in the elastomeric biomineralization protein, Lustrin A. I. The C-domain consensus-PG-, -NVNCT-motif., Zhang B, Wustman BA, Morse D, Evans JS, Biopolymers. 2002 May;63(6):358-69. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11920437 11920437]
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[[Category: Zhang B]]
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[[Category: Evans, J S.]]
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[[Category: Morse, D E.]]
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[[Category: Wustman, B A.]]
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[[Category: Zhang, B.]]
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[[Category: Loop]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 11:38:34 2008''
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Current revision

H. rufescens abalone shell Lustrin A consensus repeat, FPGKNVNCTSGE, pH 7.4, 1-H NMR structure

PDB ID 1l3q

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