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1ldq

From Proteopedia

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{{Seed}}
 
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[[Image:1ldq.png|left|200px]]
 
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<!--
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==avidin-homobiotin complex==
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The line below this paragraph, containing "STRUCTURE_1ldq", creates the "Structure Box" on the page.
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<StructureSection load='1ldq' size='340' side='right'caption='[[1ldq]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1ldq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LDQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LDQ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SHM:HOMOBIOTIN'>SHM</scene></td></tr>
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{{STRUCTURE_1ldq| PDB=1ldq | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ldq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ldq OCA], [https://pdbe.org/1ldq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ldq RCSB], [https://www.ebi.ac.uk/pdbsum/1ldq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ldq ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/AVID_CHICK AVID_CHICK] The biological function of avidin is not known. Forms a strong non-covalent specific complex with biotin (one molecule of biotin per subunit of avidin).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ld/1ldq_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ldq ConSurf].
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<div style="clear:both"></div>
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===avidin-homobiotin complex===
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==See Also==
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*[[Avidin 3D structures|Avidin 3D structures]]
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__TOC__
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<!--
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_12055191}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 12055191 is the PubMed ID number.
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{{ABSTRACT_PUBMED_12055191}}
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==About this Structure==
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1LDQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LDQ OCA].
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==Reference==
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Ligand exchange between proteins. Exchange of biotin and biotin derivatives between avidin and streptavidin., Pazy Y, Kulik T, Bayer EA, Wilchek M, Livnah O, J Biol Chem. 2002 Aug 23;277(34):30892-900. Epub 2002 Jun 7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12055191 12055191]
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[[Category: Gallus gallus]]
[[Category: Gallus gallus]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Bayer, E A.]]
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[[Category: Bayer EA]]
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[[Category: Kulik, T.]]
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[[Category: Kulik T]]
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[[Category: Livnah, O.]]
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[[Category: Livnah O]]
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[[Category: Pazy, Y.]]
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[[Category: Pazy Y]]
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[[Category: Wilchek, M.]]
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[[Category: Wilchek M]]
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[[Category: Avidin]]
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[[Category: Biotin]]
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[[Category: Ligand exchange]]
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[[Category: Streptavidin]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 12:46:33 2008''
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Current revision

avidin-homobiotin complex

PDB ID 1ldq

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