This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ljv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:10, 3 April 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1ljv.png|left|200px]]
 
-
<!--
+
==Bovine Pancreatic Polypeptide Bound to DPC Micelles==
-
The line below this paragraph, containing "STRUCTURE_1ljv", creates the "Structure Box" on the page.
+
<StructureSection load='1ljv' size='340' side='right'caption='[[1ljv]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1ljv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LJV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LJV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
-
{{STRUCTURE_1ljv| PDB=1ljv | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ljv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ljv OCA], [https://pdbe.org/1ljv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ljv RCSB], [https://www.ebi.ac.uk/pdbsum/1ljv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ljv ProSAT]</span></td></tr>
-
 
+
</table>
-
===Bovine Pancreatic Polypeptide Bound to DPC Micelles===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/PAHO_BOVIN PAHO_BOVIN] Pancreatic hormone is synthesized in pancreatic islets of Langerhans and acts as a regulator of pancreatic and gastrointestinal functions.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_12367532}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 12367532 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lj/1ljv_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_12367532}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1LJV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LJV OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ljv ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
Bovine pancreatic polypeptide (bPP) undergoes significant changes in conformation and dynamics upon binding to DPC micelles., Lerch M, Gafner V, Bader R, Christen B, Folkers G, Zerbe O, J Mol Biol. 2002 Oct 4;322(5):1117-33. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12367532 12367532]
+
</StructureSection>
[[Category: Bos taurus]]
[[Category: Bos taurus]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Bader, R.]]
+
[[Category: Bader R]]
-
[[Category: Christen, B.]]
+
[[Category: Christen B]]
-
[[Category: Gafner, V.]]
+
[[Category: Gafner V]]
-
[[Category: Lerch, M.]]
+
[[Category: Lerch M]]
-
[[Category: Zerbe, O.]]
+
[[Category: Zerbe O]]
-
[[Category: Nmr micelle peptide hormone]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 21:02:13 2008''
+

Current revision

Bovine Pancreatic Polypeptide Bound to DPC Micelles

PDB ID 1ljv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools