1lpj

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{{Seed}}
 
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[[Image:1lpj.png|left|200px]]
 
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==Human cRBP IV==
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The line below this paragraph, containing "STRUCTURE_1lpj", creates the "Structure Box" on the page.
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<StructureSection load='1lpj' size='340' side='right'caption='[[1lpj]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1lpj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LPJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LPJ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lpj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lpj OCA], [https://pdbe.org/1lpj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lpj RCSB], [https://www.ebi.ac.uk/pdbsum/1lpj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lpj ProSAT]</span></td></tr>
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{{STRUCTURE_1lpj| PDB=1lpj | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RET7_HUMAN RET7_HUMAN] Intracellular transport of retinol.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lp/1lpj_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lpj ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Three cellular retinol-binding protein (CRBP) types (CRBP I, II, and III) with distinct tissue distributions and retinoid binding properties have been structurally characterized thus far. A human binding protein, whose mRNA is expressed primarily in kidney, heart, and transverse colon, is shown here to be a CRBP family member (human CRBP IV), according to amino acid sequence, phylogenetic analysis, gene structure organization, and x-ray structural analysis. Retinol binding to CRBP IV leads to an absorption spectrum distinct from a typical holo-CRBP spectrum and is characterized by an affinity (K(d) = approximately 200 nm) lower than those for CRBP I, II, and III, as established in direct and competitive binding assays. As revealed by mutagenic analysis, the presence in CRBP IV of His(108) in place of Gln(108) is not responsible for the unusual holo-CRBP IV spectrum. The 2-A resolution crystal structure of human apo-CRBP IV is very similar to those of other structurally characterized CRBPs. The side chain of Tyr(60) is present within the binding cavity of the apoprotein and might affect the interaction with the retinol molecule. These results indicate that human CRBP IV belongs to a clearly distinct CRBP subfamily and suggest a relatively different mode of retinol binding for this binding protein.
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===Human cRBP IV===
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Ligand binding and structural analysis of a human putative cellular retinol-binding protein.,Folli C, Calderone V, Ramazzina I, Zanotti G, Berni R J Biol Chem. 2002 Nov 1;277(44):41970-7. Epub 2002 Aug 9. PMID:12177003<ref>PMID:12177003</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 1lpj" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_12177003}}, adds the Publication Abstract to the page
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*[[Cellular retinoic acid-binding protein 3D structures|Cellular retinoic acid-binding protein 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 12177003 is the PubMed ID number.
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*[[Retinol-binding protein 3D structures|Retinol-binding protein 3D structures]]
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== References ==
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{{ABSTRACT_PUBMED_12177003}}
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<references/>
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__TOC__
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==About this Structure==
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</StructureSection>
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1LPJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LPJ OCA].
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==Reference==
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Ligand binding and structural analysis of a human putative cellular retinol-binding protein., Folli C, Calderone V, Ramazzina I, Zanotti G, Berni R, J Biol Chem. 2002 Nov 1;277(44):41970-7. Epub 2002 Aug 9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12177003 12177003]
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Berni, R.]]
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[[Category: Berni R]]
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[[Category: Calderone, V.]]
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[[Category: Calderone V]]
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[[Category: Folli, C.]]
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[[Category: Folli C]]
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[[Category: Zanotti, G.]]
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[[Category: Zanotti G]]
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[[Category: Cellular retinol-binding protein]]
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[[Category: Crbp]]
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[[Category: Ilbp]]
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[[Category: Retinol]]
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[[Category: Vitamin some]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 21:43:40 2008''
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Current revision

Human cRBP IV

PDB ID 1lpj

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