1m8n

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:32, 10 April 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1m8n.png|left|200px]]
 
-
<!--
+
==Choristoneura Fumiferana (Spruce Budworm) Antifreeze Protein Isoform 501==
-
The line below this paragraph, containing "STRUCTURE_1m8n", creates the "Structure Box" on the page.
+
<StructureSection load='1m8n' size='340' side='right'caption='[[1m8n]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1m8n]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Choristoneura_fumiferana Choristoneura fumiferana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M8N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M8N FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m8n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m8n OCA], [https://pdbe.org/1m8n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m8n RCSB], [https://www.ebi.ac.uk/pdbsum/1m8n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m8n ProSAT]</span></td></tr>
-
{{STRUCTURE_1m8n| PDB=1m8n | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9GSA6_CHOFU Q9GSA6_CHOFU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m8/1m8n_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m8n ConSurf].
 +
<div style="clear:both"></div>
-
===Choristoneura Fumiferana (Spruce Budworm) Antifreeze Protein Isoform 501===
+
==See Also==
-
 
+
*[[Antifreeze protein 3D structures|Antifreeze protein 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_12105229}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 12105229 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_12105229}}
+
-
 
+
-
==About this Structure==
+
-
1M8N is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Choristoneura_fumiferana Choristoneura fumiferana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M8N OCA].
+
-
 
+
-
==Reference==
+
-
A beta-helical antifreeze protein isoform with increased activity. Structural and functional insights., Leinala EK, Davies PL, Doucet D, Tyshenko MG, Walker VK, Jia Z, J Biol Chem. 2002 Sep 6;277(36):33349-52. Epub 2002 Jun 24. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12105229 12105229]
+
[[Category: Choristoneura fumiferana]]
[[Category: Choristoneura fumiferana]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Davies, P L.]]
+
[[Category: Davies PL]]
-
[[Category: Jia, Z.]]
+
[[Category: Jia Z]]
-
[[Category: Leinala, E K.]]
+
[[Category: Leinala EK]]
-
[[Category: Antifreeze protein]]
+
-
[[Category: Left-handed beta-helix]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 23:26:55 2008''
+

Current revision

Choristoneura Fumiferana (Spruce Budworm) Antifreeze Protein Isoform 501

PDB ID 1m8n

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools