1mcq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:34, 10 April 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1mcq.png|left|200px]]
 
-
<!--
+
==PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS==
-
The line below this paragraph, containing "STRUCTURE_1mcq", creates the "Structure Box" on the page.
+
<StructureSection load='1mcq' size='340' side='right'caption='[[1mcq]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1mcq]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MCQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MCQ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=DPR:D-PROLINE'>DPR</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
-
{{STRUCTURE_1mcq| PDB=1mcq | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mcq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mcq OCA], [https://pdbe.org/1mcq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mcq RCSB], [https://www.ebi.ac.uk/pdbsum/1mcq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mcq ProSAT]</span></td></tr>
-
 
+
</table>
-
===PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS===
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
<!--
+
<jmolCheckbox>
-
The line below this paragraph, {{ABSTRACT_PUBMED_8346191}}, adds the Publication Abstract to the page
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mc/1mcq_consurf.spt"</scriptWhenChecked>
-
(as it appears on PubMed at http://www.pubmed.gov), where 8346191 is the PubMed ID number.
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
-->
+
<text>to colour the structure by Evolutionary Conservation</text>
-
{{ABSTRACT_PUBMED_8346191}}
+
</jmolCheckbox>
-
 
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mcq ConSurf].
-
==About this Structure==
+
<div style="clear:both"></div>
-
1MCQ is a [[Single protein]] structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MCQ OCA].
+
__TOC__
-
 
+
</StructureSection>
-
==Reference==
+
[[Category: Homo sapiens]]
-
Principles and pitfalls in designing site-directed peptide ligands., Edmundson AB, Harris DL, Fan ZC, Guddat LW, Schley BT, Hanson BL, Tribbick G, Geysen HM, Proteins. 1993 Jul;16(3):246-67. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8346191 8346191]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
[[Category: Edmundson AB]]
-
[[Category: Edmundson, A B.]]
+
[[Category: Fan Z-C]]
-
[[Category: Fan, Z C.]]
+
[[Category: Guddat LW]]
-
[[Category: Guddat, L W.]]
+
[[Category: Harris DL]]
-
[[Category: Harris, D L.]]
+
-
[[Category: Immunoglobulin]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 23:41:31 2008''
+

Current revision

PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS

PDB ID 1mcq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1mcq"
Personal tools