3xim

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:35, 1 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3xim.png|left|200px]]
 
-
<!--
+
==ARGININE RESIDUES AS STABILIZING ELEMENTS IN PROTEINS==
-
The line below this paragraph, containing "STRUCTURE_3xim", creates the "Structure Box" on the page.
+
<StructureSection load='3xim' size='340' side='right'caption='[[3xim]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3xim]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Actinoplanes_missouriensis Actinoplanes missouriensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3XIM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3XIM FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=SOR:D-SORBITOL'>SOR</scene></td></tr>
-
{{STRUCTURE_3xim| PDB=3xim | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3xim FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3xim OCA], [https://pdbe.org/3xim PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3xim RCSB], [https://www.ebi.ac.uk/pdbsum/3xim PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3xim ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/XYLA_ACTM4 XYLA_ACTM4]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xi/3xim_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3xim ConSurf].
 +
<div style="clear:both"></div>
-
===ARGININE RESIDUES AS STABILIZING ELEMENTS IN PROTEINS===
+
==See Also==
-
 
+
*[[D-xylose isomerase 3D structures|D-xylose isomerase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_1540579}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 1540579 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_1540579}}
+
-
 
+
-
==About this Structure==
+
-
3XIM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Actinoplanes_missouriensis Actinoplanes missouriensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3XIM OCA].
+
-
 
+
-
==Reference==
+
-
Arginine residues as stabilizing elements in proteins., Mrabet NT, Van den Broeck A, Van den brande I, Stanssens P, Laroche Y, Lambeir AM, Matthijssens G, Jenkins J, Chiadmi M, van Tilbeurgh H, et al., Biochemistry. 1992 Mar 3;31(8):2239-53. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/1540579 1540579]
+
[[Category: Actinoplanes missouriensis]]
[[Category: Actinoplanes missouriensis]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Xylose isomerase]]
+
[[Category: Chiadmi M]]
-
[[Category: Brande, I Van Den.]]
+
[[Category: Demaeyer M]]
-
[[Category: Chiadmi, M.]]
+
[[Category: Janin J]]
-
[[Category: Demaeyer, M.]]
+
[[Category: Jenkins J]]
-
[[Category: Denbroek, A Van.]]
+
[[Category: Lambeir A-M]]
-
[[Category: Janin, J.]]
+
[[Category: Laroche Y]]
-
[[Category: Jenkins, J.]]
+
[[Category: Lasters I]]
-
[[Category: Lambeir, A M.]]
+
[[Category: Matthyssens G]]
-
[[Category: Laroche, Y.]]
+
[[Category: Mrabet NT]]
-
[[Category: Lasters, I.]]
+
[[Category: Quax WJ]]
-
[[Category: Matthyssens, G.]]
+
[[Category: Rey F]]
-
[[Category: Mrabet, N T.]]
+
[[Category: Stanssens P]]
-
[[Category: Quax, W J.]]
+
[[Category: Van Den Brande I]]
-
[[Category: Rey, F.]]
+
[[Category: Van Denbroek A]]
-
[[Category: Stanssens, P.]]
+
[[Category: Vantilbeurgh H]]
-
[[Category: Vantilbeurgh, H.]]
+
[[Category: Wodak SJ]]
-
[[Category: Wodak, S J.]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jul 3 13:12:47 2008''
+

Current revision

ARGININE RESIDUES AS STABILIZING ELEMENTS IN PROTEINS

PDB ID 3xim

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3xim"
Personal tools