7rxn
From Proteopedia
(Difference between revisions)
												
			
			| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{Seed}}  | ||
| - | [[Image:7rxn.png|left|200px]]  | ||
| - | <  | + | ==STRUCTURE OF RUBREDOXIN FROM DESULFOVIBRIO VULGARIS AT 1.5 A RESOLUTION==  | 
| - | + | <StructureSection load='7rxn' size='340' side='right'caption='[[7rxn]], [[Resolution|resolution]] 1.50Å' scene=''>  | |
| - | + | == Structural highlights ==  | |
| - | + | <table><tr><td colspan='2'>[[7rxn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3rxn 3rxn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7RXN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7RXN FirstGlance]. <br>  | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5Å</td></tr>  | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>  | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7rxn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7rxn OCA], [https://pdbe.org/7rxn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7rxn RCSB], [https://www.ebi.ac.uk/pdbsum/7rxn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7rxn ProSAT]</span></td></tr>  | |
| + | </table>  | ||
| + | == Function ==  | ||
| + | [https://www.uniprot.org/uniprot/RUBR_DESVH RUBR_DESVH] Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule.  Electron acceptor for cytoplasmic lactate dehydrogenase.  | ||
| + | == Evolutionary Conservation ==  | ||
| + | [[Image:Consurf_key_small.gif|200px|right]]  | ||
| + | Check<jmol>  | ||
| + |   <jmolCheckbox>  | ||
| + |     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rx/7rxn_consurf.spt"</scriptWhenChecked>  | ||
| + |     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>  | ||
| + |     <text>to colour the structure by Evolutionary Conservation</text>  | ||
| + |   </jmolCheckbox>  | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=7rxn ConSurf].  | ||
| + | <div style="clear:both"></div>  | ||
| - | ==  | + | ==See Also==  | 
| - | + | *[[Rubredoxin 3D structures|Rubredoxin 3D structures]]  | |
| - | + | *[[Rubredoxin PDB structures|Rubredoxin PDB structures]]  | |
| - | + | __TOC__  | |
| - | + | </StructureSection>  | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Desulfovibrio vulgaris]]  | [[Category: Desulfovibrio vulgaris]]  | ||
| - | [[Category:   | + | [[Category: Large Structures]]  | 
| - | [[Category: Adman  | + | [[Category: Adman ET]]  | 
| - | [[Category: Jensen  | + | [[Category: Jensen LH]]  | 
| - | [[Category: Sieker  | + | [[Category: Sieker LC]]  | 
| - | + | ||
| - | + | ||
Current revision
STRUCTURE OF RUBREDOXIN FROM DESULFOVIBRIO VULGARIS AT 1.5 A RESOLUTION
  | |||||||||||

