This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3cvc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:38, 21 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3cvc.jpg|left|200px]]
 
-
<!--
+
==Regulation of Protein Function: Crystal Packing Interfaces and Conformational Dimerization==
-
The line below this paragraph, containing "STRUCTURE_3cvc", creates the "Structure Box" on the page.
+
<StructureSection load='3cvc' size='340' side='right'caption='[[3cvc]], [[Resolution|resolution]] 1.72&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3cvc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phormidium_laminosum Phormidium laminosum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CVC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CVC FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.72&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
{{STRUCTURE_3cvc| PDB=3cvc | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cvc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cvc OCA], [https://pdbe.org/3cvc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cvc RCSB], [https://www.ebi.ac.uk/pdbsum/3cvc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cvc ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PLAS_PHOLA PLAS_PHOLA] Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cv/3cvc_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cvc ConSurf].
 +
<div style="clear:both"></div>
-
===Regulation of Protein Function: Crystal Packing Interfaces and Conformational Dimerization===
+
==See Also==
-
 
+
*[[Plastocyanin 3D structures|Plastocyanin 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_18479147}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 18479147 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_18479147}}
+
-
 
+
-
==About this Structure==
+
-
3CVC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Phormidium_laminosum Phormidium laminosum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CVC OCA].
+
-
 
+
-
==Reference==
+
-
Regulation of Protein Function: Crystal Packing Interfaces and Conformational Dimerization., Crowley PB, Matias PM, Mi H, Firbank SJ, Banfield MJ, Dennison C, Biochemistry. 2008 May 15;. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18479147 18479147]
+
[[Category: Phormidium laminosum]]
[[Category: Phormidium laminosum]]
-
[[Category: Single protein]]
+
[[Category: Banfield MJ]]
-
[[Category: Banfield, M J.]]
+
[[Category: Crowley PB]]
-
[[Category: Crowley, P B.]]
+
[[Category: Dennison C]]
-
[[Category: Dennison, C.]]
+
[[Category: Firbank SJ]]
-
[[Category: Firbank, S J.]]
+
[[Category: Matias PM]]
-
[[Category: Matias, P M.]]
+
[[Category: Mi H]]
-
[[Category: Mi, H.]]
+
-
[[Category: Copper]]
+
-
[[Category: Cupredoxin]]
+
-
[[Category: Electron transport]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Self assembly]]
+
-
[[Category: Transport]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 9 10:28:21 2008''
+

Current revision

Regulation of Protein Function: Crystal Packing Interfaces and Conformational Dimerization

PDB ID 3cvc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3cvc"
Personal tools