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2vuv
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 2vuv is ON HOLD Authors: Gourdine, J.P., Cioci, G.C., Miguet, L., Unverzagt, C., Varrot, A., Gauthier, C., Smith-Ravin, E., Imberty, A. Description...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of Codakine at 1.3A resolution== | |
| - | + | <StructureSection load='2vuv' size='340' side='right'caption='[[2vuv]], [[Resolution|resolution]] 1.30Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2vuv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Codakia_orbicularis Codakia orbicularis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VUV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VUV FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vuv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vuv OCA], [https://pdbe.org/2vuv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vuv RCSB], [https://www.ebi.ac.uk/pdbsum/2vuv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vuv ProSAT]</span></td></tr> | |
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q3KVL7_9BIVA Q3KVL7_9BIVA] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vu/2vuv_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vuv ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Codakia orbicularis]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Cioci GC]] | ||
| + | [[Category: Gauthier C]] | ||
| + | [[Category: Gourdine JP]] | ||
| + | [[Category: Imberty A]] | ||
| + | [[Category: Miguet L]] | ||
| + | [[Category: Smith-Ravin EJ]] | ||
| + | [[Category: Unverzagt C]] | ||
| + | [[Category: Varrot A]] | ||
Current revision
Crystal structure of Codakine at 1.3A resolution
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