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3db5
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3db5 is ON HOLD until May 30 2010 Authors: Amaya, M.F., Zeng, H., Loppnau, P., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev,...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of methyltransferase domain of human PR domain-containing protein 4== | |
| - | + | <StructureSection load='3db5' size='340' side='right'caption='[[3db5]], [[Resolution|resolution]] 2.15Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3db5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DB5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DB5 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PRDM4, PFM1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3db5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3db5 OCA], [https://pdbe.org/3db5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3db5 RCSB], [https://www.ebi.ac.uk/pdbsum/3db5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3db5 ProSAT]</span></td></tr> | |
| + | </table> | ||
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/PRDM4_HUMAN PRDM4_HUMAN]] May function as a transcription factor involved in cell differentiation. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/3db5_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3db5 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Human]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Amaya, M F]] | ||
| + | [[Category: Arrowsmith, C H]] | ||
| + | [[Category: Bochkarev, A]] | ||
| + | [[Category: Bountra, C]] | ||
| + | [[Category: Edwards, A M]] | ||
| + | [[Category: Loppnau, P]] | ||
| + | [[Category: Min, J]] | ||
| + | [[Category: Plotnikov, A N]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Weigelt, J]] | ||
| + | [[Category: Wu, H]] | ||
| + | [[Category: Zeng, H]] | ||
| + | [[Category: Dna-binding]] | ||
| + | [[Category: Metal-binding]] | ||
| + | [[Category: Methyltransferase]] | ||
| + | [[Category: Nucleus]] | ||
| + | [[Category: Prdm4]] | ||
| + | [[Category: Sgc]] | ||
| + | [[Category: Transcription]] | ||
| + | [[Category: Transcription regulation]] | ||
| + | [[Category: Transferase]] | ||
| + | [[Category: Zinc-finger]] | ||
Current revision
Crystal structure of methyltransferase domain of human PR domain-containing protein 4
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Categories: Human | Large Structures | Amaya, M F | Arrowsmith, C H | Bochkarev, A | Bountra, C | Edwards, A M | Loppnau, P | Min, J | Plotnikov, A N | Structural genomic | Weigelt, J | Wu, H | Zeng, H | Dna-binding | Metal-binding | Methyltransferase | Nucleus | Prdm4 | Sgc | Transcription | Transcription regulation | Transferase | Zinc-finger
