3dc7
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3dc7 is ON HOLD Authors: Kuzin, A.P., Abashidze, M., Vorobiev, S.M., Seetharaman, J., Zhao, L., Mao, L., Ciccosanti, C., Xiao, R., Nair, R., Baran, ...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of the protein Q88SR8 from Lactobacillus plantarum. Northeast Structural Genomics consortium target LpR109.== | |
| - | + | <StructureSection load='3dc7' size='340' side='right'caption='[[3dc7]], [[Resolution|resolution]] 2.12Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3dc7]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactobacillus_plantarum Lactobacillus plantarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DC7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DC7 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dc7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dc7 OCA], [https://pdbe.org/3dc7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dc7 RCSB], [https://www.ebi.ac.uk/pdbsum/3dc7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dc7 ProSAT], [https://www.topsan.org/Proteins/NESGC/3dc7 TOPSAN]</span></td></tr> | |
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/3dc7_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dc7 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Lactobacillus plantarum]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Abashidze, M]] | ||
| + | [[Category: Acton, T B]] | ||
| + | [[Category: Baran, M C]] | ||
| + | [[Category: Ciccosanti, C]] | ||
| + | [[Category: Hunt, J F]] | ||
| + | [[Category: Kuzin, A P]] | ||
| + | [[Category: Mao, L]] | ||
| + | [[Category: Montelione, G T]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Nair, R]] | ||
| + | [[Category: Rost, B]] | ||
| + | [[Category: Seetharaman, J]] | ||
| + | [[Category: Tong, L]] | ||
| + | [[Category: Vorobiev, S M]] | ||
| + | [[Category: Xiao, R]] | ||
| + | [[Category: Zhao, L]] | ||
| + | [[Category: Nesg lpr109 x-ray lp_3323]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Unknown function]] | ||
Current revision
Crystal structure of the protein Q88SR8 from Lactobacillus plantarum. Northeast Structural Genomics consortium target LpR109.
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Categories: Lactobacillus plantarum | Large Structures | Abashidze, M | Acton, T B | Baran, M C | Ciccosanti, C | Hunt, J F | Kuzin, A P | Mao, L | Montelione, G T | Structural genomic | Nair, R | Rost, B | Seetharaman, J | Tong, L | Vorobiev, S M | Xiao, R | Zhao, L | Nesg lpr109 x-ray lp 3323 | PSI, Protein structure initiative | Unknown function
