This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3di5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 3di5 is ON HOLD until Aug 13 2009 Authors: Joint Center for Structural Genomics (JCSG) Description: ''Page seeded by [http://oca.weizmann.ac.il/o...)
Current revision (11:32, 1 February 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3di5 is ON HOLD until Aug 13 2009
+
==Crystal structure of a dinb-like protein (bce_4655) from bacillus cereus atcc 10987 at 2.01 A resolution==
-
 
+
<StructureSection load='3di5' size='340' side='right'caption='[[3di5]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
-
Authors: Joint Center for Structural Genomics (JCSG)
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3di5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus_ATCC_10987 Bacillus cereus ATCC 10987]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DI5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DI5 FirstGlance]. <br>
-
Description:
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3di5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3di5 OCA], [https://pdbe.org/3di5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3di5 RCSB], [https://www.ebi.ac.uk/pdbsum/3di5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3di5 ProSAT], [https://www.topsan.org/Proteins/JCSG/3di5 TOPSAN]</span></td></tr>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Jul 11 13:07:44 2008''
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q72ZL3_BACC1 Q72ZL3_BACC1]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/di/3di5_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3di5 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Bacillus cereus ATCC 10987]]
 +
[[Category: Large Structures]]

Current revision

Crystal structure of a dinb-like protein (bce_4655) from bacillus cereus atcc 10987 at 2.01 A resolution

PDB ID 3di5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools