This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3dli

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 3dli is ON HOLD Authors: Agarwal, Rakhi, Burley, Stephen K., Swaminathan, Subramanyam, New York Structural GenomiX Research Consortium (NYSGXRC) De...)
Current revision (09:41, 21 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3dli is ON HOLD
+
==Crystal structure of a SAM dependent methyltransferase from Archaeoglobus fulgidus==
-
 
+
<StructureSection load='3dli' size='340' side='right'caption='[[3dli]], [[Resolution|resolution]] 2.46&Aring;' scene=''>
-
Authors: Agarwal, Rakhi, Burley, Stephen K., Swaminathan, Subramanyam, New York Structural GenomiX Research Consortium (NYSGXRC)
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3dli]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DLI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DLI FirstGlance]. <br>
-
Description: Crystal structure of a SAM dependent methyltransferase from Archaeoglobus fulgidus
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.46&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dli FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dli OCA], [https://pdbe.org/3dli PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dli RCSB], [https://www.ebi.ac.uk/pdbsum/3dli PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dli ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3dli TOPSAN]</span></td></tr>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Jul 11 13:08:38 2008''
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O30190_ARCFU O30190_ARCFU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dl/3dli_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dli ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Archaeoglobus fulgidus]]
 +
[[Category: Large Structures]]
 +
[[Category: Agarwal R]]
 +
[[Category: Burley SK]]
 +
[[Category: Swaminathan S]]

Current revision

Crystal structure of a SAM dependent methyltransferase from Archaeoglobus fulgidus

PDB ID 3dli

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools