3b8k

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{{Seed}}
 
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[[Image:3b8k.png|left|200px]]
 
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==Structure of the Truncated Human Dihydrolipoyl Acetyltransferase (E2)==
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The line below this paragraph, containing "STRUCTURE_3b8k", creates the "Structure Box" on the page.
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<SX load='3b8k' size='340' side='right' viewer='molstar' caption='[[3b8k]], [[Resolution|resolution]] 8.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3b8k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B8K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B8K FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 8.8&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b8k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b8k OCA], [https://pdbe.org/3b8k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b8k RCSB], [https://www.ebi.ac.uk/pdbsum/3b8k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b8k ProSAT]</span></td></tr>
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{{STRUCTURE_3b8k| PDB=3b8k | SCENE= }}
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</table>
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== Disease ==
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===Structure of the Truncated Human Dihydrolipoyl Acetyltransferase (E2)===
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[https://www.uniprot.org/uniprot/ODP2_HUMAN ODP2_HUMAN] Note=Primary biliary cirrhosis is a chronic, progressive cholestatic liver disease characterized by the presence of antimitochondrial autoantibodies in patients' serum. It manifests with inflammatory obliteration of intra-hepatic bile duct, leading to liver cell damage and cirrhosis. Patients with primary biliary cirrhosis show autoantibodies against the E2 component of pyruvate dehydrogenase complex. Defects in DLAT are the cause of pyruvate dehydrogenase E2 deficiency (PDHE2 deficiency) [MIM:[https://omim.org/entry/245348 245348]; also known as lactic acidemia due to defect of E2 lipoyl transacetylase of the pyruvate dehydrogenase complex. Pyruvate dehydrogenase (PDH) deficiency is a major cause of primary lactic acidosis and neurological dysfunction in infancy and early childhood. In this form of PDH deficiency episodic dystonia is the major neurological manifestation, with other more common features of pyruvate dehydrogenase deficiency, such as hypotonia and ataxia, being less prominent.
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== Function ==
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[https://www.uniprot.org/uniprot/ODP2_HUMAN ODP2_HUMAN] The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2), and thereby links the glycolytic pathway to the tricarboxylic cycle.
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== Evolutionary Conservation ==
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The line below this paragraph, {{ABSTRACT_PUBMED_18184588}}, adds the Publication Abstract to the page
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[[Image:Consurf_key_small.gif|200px|right]]
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(as it appears on PubMed at http://www.pubmed.gov), where 18184588 is the PubMed ID number.
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Check<jmol>
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<jmolCheckbox>
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{{ABSTRACT_PUBMED_18184588}}
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b8/3b8k_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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==About this Structure==
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<text>to colour the structure by Evolutionary Conservation</text>
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3B8K is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B8K OCA].
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3b8k ConSurf].
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==Reference==
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<div style="clear:both"></div>
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Structures of the human pyruvate dehydrogenase complex cores: a highly conserved catalytic center with flexible N-terminal domains., Yu X, Hiromasa Y, Tsen H, Stoops JK, Roche TE, Zhou ZH, Structure. 2008 Jan;16(1):104-14. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18184588 18184588]
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__TOC__
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[[Category: Dihydrolipoyllysine-residue acetyltransferase]]
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</SX>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Hiromasa, Y.]]
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[[Category: Hiromasa Y]]
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[[Category: Roche, T E.]]
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[[Category: Roche TE]]
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[[Category: Stoops, J K.]]
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[[Category: Stoops JK]]
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[[Category: Tsen, H.]]
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[[Category: Tsen H]]
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[[Category: Yu, X.]]
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[[Category: Yu X]]
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[[Category: Zhou, Z H.]]
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[[Category: Zhou ZH]]
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[[Category: Central beta-sheet surrounded by five alpha-helice]]
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[[Category: Transferase]]
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[[Category: Virus]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 16 08:48:55 2008''
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Current revision

Structure of the Truncated Human Dihydrolipoyl Acetyltransferase (E2)

3b8k, resolution 8.80Å

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