1ji9

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(New page: 200px<br /><applet load="1ji9" size="450" color="white" frame="true" align="right" spinBox="true" caption="1ji9" /> '''Solution structure of the alpha-domain of mo...)
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'''Solution structure of the alpha-domain of mouse metallothionein-3'''<br />
 
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==Overview==
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==Solution structure of the alpha-domain of mouse metallothionein-3==
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The brain specific member of the metallothionein (MT) family of proteins, metallothionein-3, inhibits the growth and survival of neurons, in, contrast to the ubiquitous mammalian MT isoforms, MT-1 and MT-2, that are, found in most tissues and are thought to function in metal ion homeostasis, and detoxification. Solution NMR was utilized to determine the structural, and dynamic differences of MT-3 from MT-1 and 2. The high-resolution, solution structure of the C-terminal alpha-domain of recombinant mouse, MT-3 revealed a tertiary fold very similar to MT-1 and 2, except for a, loop that accommodates an acidic insertion relative to these isoforms., This loop was distinguished from the rest of the domain by dynamics of the, backbone on the nano- to picosecond time-scale shown by (15)N relaxation, studies and was identified as a possible interaction site with other, proteins. The N-terminal beta-domain contains the region responsible for, the growth inhibitory activity, a CPCP tetrapeptide close to the, N-terminus. Because of exchange broadening of a large number of the NMR, signals from this domain, homology modeling was utilized to calculate, models for the beta-domain and suggested that while the backbone fold of, the MT-3 beta-domain is identical to MT-1 and 2, the second proline, responsible for the activity, Pro9, may show structural heterogeneity., (15)N relaxation analyses implied fast internal motions for the, beta-domain. On the basis of these observations, we conclude that the, growth inhibitory activity exhibited by MT-3 is a result of a combination, of local structural differences and global dynamics in the beta-domain.
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<StructureSection load='1ji9' size='340' side='right'caption='[[1ji9]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1ji9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JI9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JI9 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ji9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ji9 OCA], [https://pdbe.org/1ji9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ji9 RCSB], [https://www.ebi.ac.uk/pdbsum/1ji9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ji9 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MT3_MOUSE MT3_MOUSE] Binds heavy metals. Contains three zinc and three copper atoms per polypeptide chain and only a negligible amount of cadmium. Inhibits survival and neurite formation of cortical neurons in vitro (By similarity).
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The brain specific member of the metallothionein (MT) family of proteins, metallothionein-3, inhibits the growth and survival of neurons, in contrast to the ubiquitous mammalian MT isoforms, MT-1 and MT-2, that are found in most tissues and are thought to function in metal ion homeostasis and detoxification. Solution NMR was utilized to determine the structural and dynamic differences of MT-3 from MT-1 and 2. The high-resolution solution structure of the C-terminal alpha-domain of recombinant mouse MT-3 revealed a tertiary fold very similar to MT-1 and 2, except for a loop that accommodates an acidic insertion relative to these isoforms. This loop was distinguished from the rest of the domain by dynamics of the backbone on the nano- to picosecond time-scale shown by (15)N relaxation studies and was identified as a possible interaction site with other proteins. The N-terminal beta-domain contains the region responsible for the growth inhibitory activity, a CPCP tetrapeptide close to the N-terminus. Because of exchange broadening of a large number of the NMR signals from this domain, homology modeling was utilized to calculate models for the beta-domain and suggested that while the backbone fold of the MT-3 beta-domain is identical to MT-1 and 2, the second proline responsible for the activity, Pro9, may show structural heterogeneity. (15)N relaxation analyses implied fast internal motions for the beta-domain. On the basis of these observations, we conclude that the growth inhibitory activity exhibited by MT-3 is a result of a combination of local structural differences and global dynamics in the beta-domain.
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==About this Structure==
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Three-dimensional structure and dynamics of a brain specific growth inhibitory factor: metallothionein-3.,Oz G, Zangger K, Armitage IM Biochemistry. 2001 Sep 25;40(38):11433-41. PMID:11560491<ref>PMID:11560491</ref>
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1JI9 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] with CD as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1JI9 OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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Three-dimensional structure and dynamics of a brain specific growth inhibitory factor: metallothionein-3., Oz G, Zangger K, Armitage IM, Biochemistry. 2001 Sep 25;40(38):11433-41. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=11560491 11560491]
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</div>
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<div class="pdbe-citations 1ji9" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
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[[Category: Single protein]]
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[[Category: Armitage IM]]
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[[Category: Armitage, I.M.]]
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[[Category: Oz G]]
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[[Category: Oz, G.]]
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[[Category: Zangger K]]
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[[Category: Zangger, K.]]
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[[Category: CD]]
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[[Category: 3-10 helix]]
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[[Category: cd-s cluster]]
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[[Category: half turn]]
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[[Category: type ii turn]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 18:17:15 2007''
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Current revision

Solution structure of the alpha-domain of mouse metallothionein-3

PDB ID 1ji9

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