2bbd

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{{Seed}}
 
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[[Image:2bbd.png|left|200px]]
 
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==Crystal Structure of the STIV MCP==
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The line below this paragraph, containing "STRUCTURE_2bbd", creates the "Structure Box" on the page.
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<StructureSection load='2bbd' size='340' side='right'caption='[[2bbd]], [[Resolution|resolution]] 2.04&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2bbd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfolobus_turreted_icosahedral_virus_1 Sulfolobus turreted icosahedral virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BBD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BBD FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.04&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_2bbd| PDB=2bbd | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bbd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bbd OCA], [https://pdbe.org/2bbd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bbd RCSB], [https://www.ebi.ac.uk/pdbsum/2bbd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bbd ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q6Q0J0_9VIRU Q6Q0J0_9VIRU]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Archaea and their viruses are poorly understood when compared with the Eukarya and Bacteria domains of life. We report here the crystal structure of the major capsid protein (MCP) of the Sulfolobus turreted icosahedral virus, an archaeal virus isolated from an acidic hot spring (pH 2-4, 72-92 degrees C) in Yellowstone National Park. The structure is nearly identical to the MCP structures of the eukaryotic Paramecium bursaria Chlorella virus, and the bacteriophage PRD1, and shows a common fold with the mammalian adenovirus. Structural analysis of the capsid architecture, determined by fitting the subunit into the electron cryomicroscopy reconstruction of the virus, identified a number of key interactions that are akin to those observed in adenovirus and PRD1. The similar capsid proteins and capsid architectures strongly suggest that these viral capsids originated and evolved from a common ancestor. Hence, this work provides a previously undescribed example of a viral relationship spanning the three domains of life (Eukarya, Bacteria, and Archaea). The MCP structure also provides insights into the stabilizing forces required for extracellular hyperthermophilic proteins to tolerate high-temperature hot springs.
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===Crystal Structure of the STIV MCP===
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Structure of an archaeal virus capsid protein reveals a common ancestry to eukaryotic and bacterial viruses.,Khayat R, Tang L, Larson ET, Lawrence CM, Young M, Johnson JE Proc Natl Acad Sci U S A. 2005 Dec 27;102(52):18944-9. Epub 2005 Dec 15. PMID:16357204<ref>PMID:16357204</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 2bbd" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_16357204}}, adds the Publication Abstract to the page
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*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 16357204 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_16357204}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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2BBD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_turreted_icosahedral_virus Sulfolobus turreted icosahedral virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BBD OCA].
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[[Category: Sulfolobus turreted icosahedral virus 1]]
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[[Category: Khayat R]]
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==Reference==
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Structure of an archaeal virus capsid protein reveals a common ancestry to eukaryotic and bacterial viruses., Khayat R, Tang L, Larson ET, Lawrence CM, Young M, Johnson JE, Proc Natl Acad Sci U S A. 2005 Dec 27;102(52):18944-9. Epub 2005 Dec 15. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16357204 16357204]
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[[Category: Single protein]]
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[[Category: Sulfolobus turreted icosahedral virus]]
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[[Category: Khayat, R.]]
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[[Category: Archaea]]
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[[Category: Crystal]]
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[[Category: Evolution]]
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[[Category: Hyperthermophile]]
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[[Category: Virus]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 12:25:14 2008''
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Crystal Structure of the STIV MCP

PDB ID 2bbd

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