This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1qda

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:15, 14 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1qda.png|left|200px]]
 
-
<!--
+
==Crystal structure of epidoxorubicin-formaldehyde virtual crosslink of DNA==
-
The line below this paragraph, containing "STRUCTURE_1qda", creates the "Structure Box" on the page.
+
<StructureSection load='1qda' size='340' side='right'caption='[[1qda]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1qda]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QDA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QDA FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DM6:4-EPIDOXORUBICIN'>DM6</scene>, <scene name='pdbligand=G49:N2-METHYL-2-DEOXY-GUANOSINE-5-MONOPHOSPHATE'>G49</scene></td></tr>
-
{{STRUCTURE_1qda| PDB=1qda | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qda FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qda OCA], [https://pdbe.org/1qda PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qda RCSB], [https://www.ebi.ac.uk/pdbsum/1qda PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qda ProSAT]</span></td></tr>
-
 
+
</table>
-
===CRYSTAL STRUCTURE OF EPIDOXORUBICIN-FORMALDEHYDE VIRTUAL CROSSLINK OF DNA===
+
__TOC__
-
 
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
<!--
+
[[Category: Harrington DJ]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_10489446}}, adds the Publication Abstract to the page
+
[[Category: Koch TH]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 10489446 is the PubMed ID number.
+
[[Category: Podell ER]]
-
-->
+
[[Category: Taatjes DJ]]
-
{{ABSTRACT_PUBMED_10489446}}
+
-
 
+
-
==About this Structure==
+
-
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QDA OCA].
+
-
 
+
-
==Reference==
+
-
Crystal structure of epidoxorubicin-formaldehyde virtual crosslink of DNA and evidence for its formation in human breast-cancer cells., Podell ER, Harrington DJ, Taatjes DJ, Koch TH, Acta Crystallogr D Biol Crystallogr. 1999 Sep;55(Pt 9):1516-23. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10489446 10489446]
+
-
[[Category: Harrington, D J.]]
+
-
[[Category: Koch, T H.]]
+
-
[[Category: Podell, E R.]]
+
-
[[Category: Taatjes, D J.]]
+
-
[[Category: Double helix]]
+
-
[[Category: Drug-dna complex]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 13:03:07 2008''
+

Current revision

Crystal structure of epidoxorubicin-formaldehyde virtual crosslink of DNA

PDB ID 1qda

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1qda"
Personal tools