2bnp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:47, 13 December 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2bnp.png|left|200px]]
 
-
<!--
+
==Lipidic cubic phase grown reaction centre from Rhodobacter sphaeroides, ground state==
-
The line below this paragraph, containing "STRUCTURE_2bnp", creates the "Structure Box" on the page.
+
<StructureSection load='2bnp' size='340' side='right'caption='[[2bnp]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2bnp]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Cereibacter_sphaeroides Cereibacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BNP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BNP FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCL:BACTERIOCHLOROPHYLL+A'>BCL</scene>, <scene name='pdbligand=BPH:BACTERIOPHEOPHYTIN+A'>BPH</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=MST:2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S-TRIAZINE'>MST</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=U10:UBIQUINONE-10'>U10</scene></td></tr>
-
{{STRUCTURE_2bnp| PDB=2bnp | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bnp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bnp OCA], [https://pdbe.org/2bnp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bnp RCSB], [https://www.ebi.ac.uk/pdbsum/2bnp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bnp ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RCEH_CERSP RCEH_CERSP] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bn/2bnp_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bnp ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
In bright light the photosynthetic reaction center (RC) of Rhodobacter sphaeroides stabilizes the P(+)(870).Q(-)(A) charge-separated state and thereby minimizes the potentially harmful effects of light saturation. Using X-ray diffraction we report a conformational change that occurs within the cytoplasmic domain of this RC in response to prolonged illumination with bright light. Our observations suggest a novel structural mechanism for the regulation of electron transfer reactions in photosynthesis.
-
===LIPIDIC CUBIC PHASE GROWN REACTION CENTRE FROM RHODOBACTER SPHAEROIDES, GROUND STATE===
+
Conformational regulation of charge recombination reactions in a photosynthetic bacterial reaction center.,Katona G, Snijder A, Gourdon P, Andreasson U, Hansson O, Andreasson LE, Neutze R Nat Struct Mol Biol. 2005 Jul;12(7):630-1. Epub 2005 Jun 5. PMID:15937492<ref>PMID:15937492</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<!--
+
</div>
-
The line below this paragraph, {{ABSTRACT_PUBMED_15937492}}, adds the Publication Abstract to the page
+
<div class="pdbe-citations 2bnp" style="background-color:#fffaf0;"></div>
-
(as it appears on PubMed at http://www.pubmed.gov), where 15937492 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_15937492}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
[[Category: Cereibacter sphaeroides]]
-
2BNP is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Rhodobacter_sphaeroides Rhodobacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BNP OCA].
+
[[Category: Large Structures]]
-
 
+
[[Category: Andreasson LE]]
-
==Reference==
+
[[Category: Andreasson U]]
-
Conformational regulation of charge recombination reactions in a photosynthetic bacterial reaction center., Katona G, Snijder A, Gourdon P, Andreasson U, Hansson O, Andreasson LE, Neutze R, Nat Struct Mol Biol. 2005 Jul;12(7):630-1. Epub 2005 Jun 5. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15937492 15937492]
+
[[Category: Gourdon P]]
-
[[Category: Protein complex]]
+
[[Category: Hansson O]]
-
[[Category: Rhodobacter sphaeroides]]
+
[[Category: Katona G]]
-
[[Category: Andreasson, L E.]]
+
[[Category: Neutze R]]
-
[[Category: Andreasson, U.]]
+
[[Category: Snijder A]]
-
[[Category: Gourdon, P.]]
+
-
[[Category: Hansson, O.]]
+
-
[[Category: Katona, G.]]
+
-
[[Category: Neutze, R.]]
+
-
[[Category: Snijder, A.]]
+
-
[[Category: Bacterial photosynthesis]]
+
-
[[Category: Bacteriochlorophyll]]
+
-
[[Category: Chlorophyll]]
+
-
[[Category: Chromophore]]
+
-
[[Category: Electron transport]]
+
-
[[Category: Ground state]]
+
-
[[Category: Intermediate trapping]]
+
-
[[Category: Iron]]
+
-
[[Category: Lipidic cubic phase]]
+
-
[[Category: Magnesium]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Reaction centre]]
+
-
[[Category: Transmembrane]]
+
-
[[Category: Transport]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 13:12:53 2008''
+

Current revision

Lipidic cubic phase grown reaction centre from Rhodobacter sphaeroides, ground state

PDB ID 2bnp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools