This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2pn9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:05, 1 May 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2pn9.png|left|200px]]
 
-
<!--
+
==NMR structure of a kissing complex formed between the TAR RNA element of HIV-1 and a LNA modified aptamer==
-
The line below this paragraph, containing "STRUCTURE_2pn9", creates the "Structure Box" on the page.
+
<StructureSection load='2pn9' size='340' side='right'caption='[[2pn9]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2pn9]] is a 2 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PN9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PN9 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=10C:4-AMINO-1-{2,5-ANHYDRO-4-[(PHOSPHONOOXY)METHYL]-ALPHA-L-LYXOFURANOSYL}PYRIMIDIN-2(1H)-ONE'>10C</scene>, <scene name='pdbligand=LCA:[(1R,3R,4R,7S)-7-HYDROXY-3-(ADENIN-9-YL)-2,5-DIOXABICYCLO[2.2.1]HEPT-1-YL]METHYL+DIHYDROGEN+PHOSPHATE'>LCA</scene></td></tr>
-
{{STRUCTURE_2pn9| PDB=2pn9 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pn9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pn9 OCA], [https://pdbe.org/2pn9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pn9 RCSB], [https://www.ebi.ac.uk/pdbsum/2pn9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pn9 ProSAT]</span></td></tr>
-
 
+
</table>
-
===NMR structure of a kissing complex formed between the TAR RNA element of HIV-1 and a LNA modified aptamer===
+
__TOC__
-
 
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
<!--
+
[[Category: Di Primo C]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_17768146}}, adds the Publication Abstract to the page
+
[[Category: Lebars I]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 17768146 is the PubMed ID number.
+
[[Category: Richard T]]
-
-->
+
[[Category: Toulme J-J]]
-
{{ABSTRACT_PUBMED_17768146}}
+
-
 
+
-
==About this Structure==
+
-
Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PN9 OCA].
+
-
 
+
-
==Reference==
+
-
NMR structure of a kissing complex formed between the TAR RNA element of HIV-1 and a LNA-modified aptamer., Lebars I, Richard T, Di Primo C, Toulme JJ, Nucleic Acids Res. 2007;35(18):6103-14. Epub 2007 Sep 3. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17768146 17768146]
+
-
[[Category: Lebars, I.]]
+
-
[[Category: Primo, C Di.]]
+
-
[[Category: Richard, T.]]
+
-
[[Category: Toulme, J J.]]
+
-
[[Category: Aptamer]]
+
-
[[Category: Hiv-1]]
+
-
[[Category: Kissing]]
+
-
[[Category: Lna]]
+
-
[[Category: Locked nucleic acid]]
+
-
[[Category: Nmr]]
+
-
[[Category: Rna]]
+
-
[[Category: Tar]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 13:54:36 2008''
+

Current revision

NMR structure of a kissing complex formed between the TAR RNA element of HIV-1 and a LNA modified aptamer

PDB ID 2pn9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2pn9"
Personal tools