1k38
From Proteopedia
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(New page: 200px<br /><applet load="1k38" size="450" color="white" frame="true" align="right" spinBox="true" caption="1k38, resolution 1.50Å" /> '''CRYSTAL STRUCTURE OF...) |
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| - | [[Image:1k38.jpg|left|200px]]<br /><applet load="1k38" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1k38, resolution 1.50Å" /> | ||
| - | '''CRYSTAL STRUCTURE OF THE CLASS D BETA-LACTAMASE OXA-2'''<br /> | ||
| - | == | + | ==CRYSTAL STRUCTURE OF THE CLASS D BETA-LACTAMASE OXA-2== |
| - | + | <StructureSection load='1k38' size='340' side='right'caption='[[1k38]], [[Resolution|resolution]] 1.50Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | [ | + | <table><tr><td colspan='2'>[[1k38]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K38 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K38 FirstGlance]. <br> |
| - | [ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5Å</td></tr> |
| - | [ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k38 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k38 OCA], [https://pdbe.org/1k38 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k38 RCSB], [https://www.ebi.ac.uk/pdbsum/1k38 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k38 ProSAT]</span></td></tr> |
| - | [[ | + | </table> |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/BLO2_SALTM BLO2_SALTM] This is an oxacillin-hydrolyzing beta-lactamase. | |
| - | + | == Evolutionary Conservation == | |
| - | [ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[ | + | Check<jmol> |
| - | [ | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k3/1k38_consurf.spt"</scriptWhenChecked> | |
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k38 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Beta-lactamase 3D structures|Beta-lactamase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Salmonella enterica subsp. enterica serovar Typhimurium]] | ||
| + | [[Category: Bouillenne F]] | ||
| + | [[Category: Charlier P]] | ||
| + | [[Category: Fonze E]] | ||
| + | [[Category: Frere JM]] | ||
| + | [[Category: Kerff F]] | ||
Current revision
CRYSTAL STRUCTURE OF THE CLASS D BETA-LACTAMASE OXA-2
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